/[MITgcm]/manual/manual.tex
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revision 1.1 by adcroft, Wed Aug 8 16:15:12 2001 UTC revision 1.5 by heimbach, Thu Oct 4 19:30:23 2001 UTC
# Line 5  Line 5 
5    
6  \usepackage{amsfonts}  \usepackage{amsfonts}
7  \usepackage{amsmath}  \usepackage{amsmath}
8  \usepackage{html}  \usepackage{/usr/local/pkg/latex2html/current/texinputs/html}
9  \usepackage{epsfig}  \usepackage{epsfig}
10  \usepackage{graphics,subfigure}  \usepackage{graphics,subfigure}
11  \usepackage{array}  \usepackage{array}
12  \usepackage{multirow}  \usepackage{multirow}
13  \usepackage{fancyhdr}  \usepackage{fancyhdr}
14  \usepackage{psfrag}  \usepackage{psfrag}
15  \usepackage{oldgerm}  %\usepackage{oldgerm}
16  \usepackage{palatcm}              % better PDF  % I commented the following because it introduced excessive white space
17    %\usepackage{palatcm}              % better PDF
18    
19  % page headers and footers  % page headers and footers
20  \pagestyle{fancy}  %\pagestyle{fancy}
21  \fancyhead{}  \fancyhead{}
22  \fancyhead[LO]{\slshape \rightmark}  \fancyhead[LO]{\slshape \rightmark}
23  \fancyhead[RE]{\slshape \leftmark}  \fancyhead[RE]{\slshape \leftmark}
# Line 26  Line 27 
27  \renewcommand{\headrulewidth}{0.4pt}  \renewcommand{\headrulewidth}{0.4pt}
28  \renewcommand{\footrulewidth}{0.4pt}  \renewcommand{\footrulewidth}{0.4pt}
29    
30    % bibtex stuff
31    \newcommand{\BIBPATH}{.}
32    \usepackage{natbib}
33    \bibliographystyle{\BIBPATH/jmr_my}
34    \gdef\harvardleft{[}
35    \gdef\harvardright{]}
36    \bibpunct{[}{]}{,}{a}{}{,}
37    
38  % referencing  % referencing
39  \newcommand{\refequ}[1]{equation (\ref{equ:#1})}  \newcommand{\refequ}[1]{equation (\ref{equ:#1})}
40  \newcommand{\refequbig}[1]{Equation (\ref{equ:#1})}  \newcommand{\refequbig}[1]{Equation (\ref{equ:#1})}
# Line 38  Line 47 
47  \newcommand{\textinfigure}[1]{{\footnotesize\textbf{\textsf{#1}}}}  \newcommand{\textinfigure}[1]{{\footnotesize\textbf{\textsf{#1}}}}
48  \newcommand{\mathinfigure}[1]{\small\ensuremath{{#1}}}  \newcommand{\mathinfigure}[1]{\small\ensuremath{{#1}}}
49    
50    % This allows numbering of subsubsections
51    \setcounter{secnumdepth}{3}
52    % This changes the the chapter title
53    %\renewcommand{\chaptername}{Section}
54    
55    \usepackage{showlabels}
56    
57    
58  \begin{document}  \begin{document}
# Line 45  Line 60 
60  \tableofcontents  \tableofcontents
61  \pagebreak  \pagebreak
62    
63  % Part: Overview  \part{The MIT GCM basics}
64    
65    % Section: Overview
66  \input{part1/part1}  \input{part1/part1}
67  \pagebreak  \pagebreak
68    
69  % Part: Discretization and Algorithm  % Section: Discretization and Algorithm
70  \input{part2/part2}  \input{part2/part2}
71  \pagebreak  \pagebreak
72    
73  % Part: Getting started  % Section: Getting started
74  \input{part3/part3}  \input{part3/part3}
75  \pagebreak  \pagebreak
76    
77  % Part: Software Architecture  % Section: Software Architecture
78  \input{part4/part4}  \input{part4/part4}
79  \pagebreak  \pagebreak
80    
81  % Part: Automatic Differentiation  
82    \part{Adjoint of the MIT GCM}
83    
84    % Section: Automatic Differentiation
85  \input{part5/part5}  \input{part5/part5}
86  \pagebreak  \pagebreak
87    
88  % Part: Physical Packages  
89    \part{Additional features}
90    
91    % Section: Physical Packages
92  \input{part6/part6}  \input{part6/part6}
93  \pagebreak  \pagebreak
94    
95  % Part: Diagnostics  % Section: Diagnostics
96  \input{part7/part7}  \input{part7/part7}
97  \pagebreak  \pagebreak
98    
99  % Part: ECCO Interface  % Section: ECCO Interface
100  \input{part8/part8}  \input{part8/part8}
101    
102    % Section: References:
103    \bibliography{\BIBPATH/manual_references}
104  \end{document}  \end{document}
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