| 11 |
\usepackage{html} |
\usepackage{html} |
| 12 |
\usepackage{hthtml} |
\usepackage{hthtml} |
| 13 |
\usepackage{graphicx} |
\usepackage{graphicx} |
| 14 |
|
\usepackage{rotating} |
| 15 |
|
|
| 16 |
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% CNH playing around with page widths |
| 17 |
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\usepackage{anysize} |
| 18 |
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|
| 19 |
%cnh%\usepackage{array} |
%cnh%\usepackage{array} |
| 20 |
%cnh%\usepackage{multirow} |
%cnh%\usepackage{multirow} |
| 25 |
%afe seems like these need to be long, sorry |
%afe seems like these need to be long, sorry |
| 26 |
\newcommand{\varlink}[2]{\htmladdnormallink{\tt #1}{../code_reference/vdb/byname/#2.html}} |
\newcommand{\varlink}[2]{\htmladdnormallink{\tt #1}{../code_reference/vdb/byname/#2.html}} |
| 27 |
\newcommand{\filelink}[2]{\htmladdnormallink{\bf \tt #1}{../code_reference/vdb/byname/#2.html}} |
\newcommand{\filelink}[2]{\htmladdnormallink{\bf \tt #1}{../code_reference/vdb/byname/#2.html}} |
| 28 |
|
\newcommand{\myhref}[2]{\htmladdnormallink{#2}{#1}} |
| 29 |
|
|
| 30 |
% afe Commands to standardize typesetting |
% afe Commands to standardize typesetting |
| 31 |
\newcommand{\file}[1]{\texttt{#1}} |
\newcommand{\file}[1]{\texttt{#1}} |
| 95 |
%aja%\gdef\harvardleft{[} |
%aja%\gdef\harvardleft{[} |
| 96 |
%aja%\gdef\harvardright{]} |
%aja%\gdef\harvardright{]} |
| 97 |
%aja%\bibpunct{[}{]}{,}{a}{}{,} |
%aja%\bibpunct{[}{]}{,}{a}{}{,} |
| 98 |
\bibliographystyle{plain} |
%\bibliographystyle{plain} |
| 99 |
|
%-jmc: try agu bib-style (give author names & year instead of just a number) |
| 100 |
|
%% \usepackage[square] |
| 101 |
|
\usepackage[square]{natbib} |
| 102 |
|
\bibliographystyle{agu} |
| 103 |
|
%% \bibliographystyle{aguurl} |
| 104 |
|
|
| 105 |
% referencing |
% referencing |
| 106 |
%ph%\newcommand{\refequ}[1]{equation (\ref{equ:#1})} |
%ph%\newcommand{\refequ}[1]{equation (\ref{equ:#1})} |
| 123 |
% This allows hyperlinks in PDF |
% This allows hyperlinks in PDF |
| 124 |
% hyperref package and colors for hyperref package |
% hyperref package and colors for hyperref package |
| 125 |
\usepackage{color} |
\usepackage{color} |
| 126 |
\usepackage[dvips]{hyperref} |
\usepackage{hyperref} |
| 127 |
|
%\usepackage[dvips] |
| 128 |
\definecolor{darkgreen}{rgb}{0,0.4,0} |
\definecolor{darkgreen}{rgb}{0,0.4,0} |
| 129 |
\definecolor{darkblue}{rgb}{0,0,0.4} |
\definecolor{darkblue}{rgb}{0,0,0.4} |
| 130 |
\definecolor{darkred}{rgb}{0.5,0,0} |
\definecolor{darkred}{rgb}{0.5,0,0} |
| 154 |
|
|
| 155 |
\def\blankpage{ \vspace*{\fill} \vspace{5in} \vfill \newpage} |
\def\blankpage{ \vspace*{\fill} \vspace{5in} \vfill \newpage} |
| 156 |
|
|
| 157 |
|
% Some definitions modified from the ones provided by Baylor |
| 158 |
|
\def\BFKav#1{\overline{#1}} |
| 159 |
|
\def\BFKpd#1#2{{\frac{\partial{#2}}{\partial{#1}}}} |
| 160 |
|
\def\BFKpds#1#2{{\frac{\partial^2{#2}}{{\partial{#1}}^2}}} |
| 161 |
|
\def\BFKDt#1{\frac{D{#1}}{Dt}} |
| 162 |
|
\def\BFKaDt#1{\frac{\BFKav D{#1}}{\BFKav{Dt}}} |
| 163 |
|
\def\BFKd#1{{\,\rm d#1}} |
| 164 |
|
\def\BFKRo{{\rm Ro}} |
| 165 |
|
\def\BFKRe{{\rm Re}} |
| 166 |
|
\def\BFKFr{{\rm Fr}} |
| 167 |
|
\def\BFKPr{{\rm Pr}} |
| 168 |
|
\def\BFKMr{{M_{Ro}}} |
| 169 |
|
\def\BFKtu{{\tilde u}} |
| 170 |
|
\def\BFKtv{{\tilde v}} |
| 171 |
|
\def\BFKatu{{\tilde {\BFKav u}}} |
| 172 |
|
\def\BFKatv{{\tilde {\BFKav v}}} |
| 173 |
|
\def\BFKlesssim{{<\atop\sim}} |
| 174 |
|
|
| 175 |
|
% Definitions from EH3: |
| 176 |
|
\def\CC{C\raise.3ex\hbox{{\footnotesize |
| 177 |
|
+}}\raise.3ex\hbox{\footnotesize +}\ } |
| 178 |
|
|
| 179 |
\begin{document} |
\begin{document} |
| 180 |
|
|
| 181 |
\bodytext{bgcolor="#FFFFFFFF"} |
\bodytext{bgcolor="#FFFFFFFF"} |
| 182 |
|
|
| 183 |
|
\title{ \textsc{MITgcm User Manual} } |
| 184 |
|
|
| 185 |
|
\author{ |
| 186 |
|
John Marshall \and Alistair Adcroft \and Jean-Michel Campin |
| 187 |
|
\and Patrick Heimbach \and Andrea Molod \and Stephanie Dutkiewicz |
| 188 |
|
\and Helen Hill \and Martin Losch \and Baylor Fox-Kemper |
| 189 |
|
\and Dimitris Menemenlis \and David Ferreira \and Ed Hill |
| 190 |
|
\and Mick Follows \and Chris Hill \and Constantinos Evangelinos |
| 191 |
|
\and Gael Forget |
| 192 |
|
\\ |
| 193 |
|
\\ |
| 194 |
|
\\ |
| 195 |
|
MIT Department of EAPS \\ |
| 196 |
|
77 Massachusetts Ave. \\ |
| 197 |
|
Cambridge, MA \ 02139-4307 |
| 198 |
|
} |
| 199 |
|
|
| 200 |
|
\date{August 19, 2004} |
| 201 |
|
|
| 202 |
|
\maketitle |
| 203 |
|
|
| 204 |
\tableofcontents |
\tableofcontents |
| 205 |
%\pagebreak |
%\pagebreak |
| 206 |
|
|
| 236 |
\input{part6/part6} |
\input{part6/part6} |
| 237 |
%\pagebreak |
%\pagebreak |
| 238 |
|
|
| 239 |
% Section: Diagnostics |
% Section: Pre-processing and Post-processing Tools |
| 240 |
\input{part7/part7} |
\input{part7/part7} |
| 241 |
%\pagebreak |
%\pagebreak |
| 242 |
|
|
| 252 |
%\markboth{BIBLIOGRAPHY}{BIBLIOGRAPHY} |
%\markboth{BIBLIOGRAPHY}{BIBLIOGRAPHY} |
| 253 |
\addcontentsline{toc}{chapter}{BIBLIOGRAPHY} |
\addcontentsline{toc}{chapter}{BIBLIOGRAPHY} |
| 254 |
%aja%\bibliography{\BIBPATH/manual_references} |
%aja%\bibliography{\BIBPATH/manual_references} |
| 255 |
\bibliography{manual_references} |
\bibliography{manual_references,baylor_biblio} |
| 256 |
|
|
| 257 |
\end{document} |
\end{document} |
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