| 25 |
%afe seems like these need to be long, sorry |
%afe seems like these need to be long, sorry |
| 26 |
\newcommand{\varlink}[2]{\htmladdnormallink{\tt #1}{../code_reference/vdb/byname/#2.html}} |
\newcommand{\varlink}[2]{\htmladdnormallink{\tt #1}{../code_reference/vdb/byname/#2.html}} |
| 27 |
\newcommand{\filelink}[2]{\htmladdnormallink{\bf \tt #1}{../code_reference/vdb/byname/#2.html}} |
\newcommand{\filelink}[2]{\htmladdnormallink{\bf \tt #1}{../code_reference/vdb/byname/#2.html}} |
| 28 |
|
\newcommand{\myhref}[2]{\htmladdnormallink{#2}{#1}} |
| 29 |
|
|
| 30 |
% afe Commands to standardize typesetting |
% afe Commands to standardize typesetting |
| 31 |
\newcommand{\file}[1]{\texttt{#1}} |
\newcommand{\file}[1]{\texttt{#1}} |
| 97 |
%aja%\bibpunct{[}{]}{,}{a}{}{,} |
%aja%\bibpunct{[}{]}{,}{a}{}{,} |
| 98 |
%\bibliographystyle{plain} |
%\bibliographystyle{plain} |
| 99 |
%-jmc: try agu bib-style (give author names & year instead of just a number) |
%-jmc: try agu bib-style (give author names & year instead of just a number) |
| 100 |
|
%% \usepackage[square] |
| 101 |
\usepackage[square]{natbib} |
\usepackage[square]{natbib} |
| 102 |
\bibliographystyle{agu} |
\bibliographystyle{agu} |
| 103 |
|
%% \bibliographystyle{aguurl} |
| 104 |
|
|
| 105 |
% referencing |
% referencing |
| 106 |
%ph%\newcommand{\refequ}[1]{equation (\ref{equ:#1})} |
%ph%\newcommand{\refequ}[1]{equation (\ref{equ:#1})} |
| 207 |
%\pagebreak |
%\pagebreak |
| 208 |
|
|
| 209 |
% Section: Discretization and Algorithm |
% Section: Discretization and Algorithm |
| 210 |
\input{part2/part2} |
%% \input{part2/part2} |
| 211 |
%\pagebreak |
%\pagebreak |
| 212 |
|
|
| 213 |
% Section: Getting started |
% Section: Getting started |
| 214 |
\input{part3/part3} |
%% \input{part3/part3} |
| 215 |
%\pagebreak |
%\pagebreak |
| 216 |
|
|
| 217 |
% Section: Software Architecture |
% Section: Software Architecture |
| 218 |
\input{part4/part4} |
%% \input{part4/part4} |
| 219 |
%\pagebreak |
%\pagebreak |
| 220 |
|
|
| 221 |
|
|
| 222 |
%\part{Adjoint of the MIT GCM} |
%\part{Adjoint of the MIT GCM} |
| 223 |
|
|
| 224 |
% Section: Automatic Differentiation |
% Section: Automatic Differentiation |
| 225 |
\input{part5/part5} |
%% \input{part5/part5} |
| 226 |
%\pagebreak |
%\pagebreak |
| 227 |
|
|
| 228 |
|
|
| 229 |
%\part{Additional features} |
%\part{Additional features} |
| 230 |
|
|
| 231 |
% Section: Physical Packages |
% Section: Physical Packages |
| 232 |
\input{part6/part6} |
%% \input{part6/part6} |
| 233 |
%\pagebreak |
%\pagebreak |
| 234 |
|
|
| 235 |
% Section: Pre-processing and Post-processing Tools |
% Section: Pre-processing and Post-processing Tools |
| 236 |
\input{part7/part7} |
%% \input{part7/part7} |
| 237 |
%\pagebreak |
%\pagebreak |
| 238 |
|
|
| 239 |
% Section: ECCO |
% Section: ECCO |
| 240 |
\input{part8/part8} |
%% \input{part8/part8} |
| 241 |
%\pagebreak |
%\pagebreak |
| 242 |
|
|
| 243 |
% Section: Model Uses |
% Section: Model Uses |
| 244 |
\input{model_uses} |
%% \input{model_uses} |
| 245 |
%\pagebreak |
%\pagebreak |
| 246 |
|
|
| 247 |
% Section: References: |
% Section: References: |
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