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Revision 1.11 - (hide annotations) (download) (as text)
Tue Nov 13 16:45:58 2001 UTC (22 years, 4 months ago) by adcroft
Branch: MAIN
Changes since 1.10: +19 -1 lines
File MIME type: application/x-tex
Changes for hyperlinks in PDF.

1 adcroft 1.11 % $Header: /u/gcmpack/mitgcmdoc/manual.tex,v 1.10 2001/11/13 15:00:00 adcroft Exp $
2 adcroft 1.2 % $Name: $
3 adcroft 1.1
4     \documentclass[12pt]{book}
5    
6 adcroft 1.8 %To help cross-reference
7     %\usepackage{showlabels}
8    
9     %aja%\usepackage{amsfonts}
10 adcroft 1.1 \usepackage{amsmath}
11 cnh 1.7 \usepackage{html}
12 adcroft 1.10 \usepackage{graphicx}
13 adcroft 1.8
14     %cnh%\usepackage{array}
15     %cnh%\usepackage{multirow}
16    
17     %ph%\usepackage{epsfig}
18     %ph%\usepackage{psfrag}
19     %ph%\usepackage{oldgerm}
20    
21 adcroft 1.2 % I commented the following because it introduced excessive white space
22 adcroft 1.8 %aja%\usepackage{palatcm} % better PDF
23 adcroft 1.1
24     % page headers and footers
25 adcroft 1.8 %cnh%\usepackage{fancyhdr}
26 adcroft 1.2 %\pagestyle{fancy}
27 adcroft 1.8 %cnh%\fancyhead{}
28     %cnh%\fancyhead[LO]{\slshape \rightmark}
29     %cnh%\fancyhead[RE]{\slshape \leftmark}
30     %cnh%\fancyhead[RO,LE]{\thepage}
31     %cnh%\fancyfoot[CO,CE]{\today}
32     %cnh%\fancyfoot[RO,LE]{ }
33     %cnh%\renewcommand{\headrulewidth}{0.4pt}
34     %cnh%\renewcommand{\footrulewidth}{0.4pt}
35 adcroft 1.1
36 heimbach 1.5 % bibtex stuff
37 adcroft 1.10 %aja%\newcommand{\BIBPATH}{.}
38     %aja%\usepackage{natbib}
39     %aja%\bibliographystyle{\BIBPATH/jmr_my}
40     %aja%\gdef\harvardleft{[}
41     %aja%\gdef\harvardright{]}
42     %aja%\bibpunct{[}{]}{,}{a}{}{,}
43     \bibliographystyle{plain}
44 heimbach 1.5
45 adcroft 1.1 % referencing
46 adcroft 1.8 %ph%\newcommand{\refequ}[1]{equation (\ref{equ:#1})}
47     %ph%\newcommand{\refequbig}[1]{Equation (\ref{equ:#1})}
48     %ph%\newcommand{\reftab}[1]{Tab.~\ref{tab:#1}}
49     %ph%\newcommand{\reftabno}[1]{\ref{tab:#1}}
50     %ph%\newcommand{\reffig}[1]{Fig.~\ref{fig:#1}}
51     %ph%\newcommand{\reffigno}[1]{\ref{fig:#1}}
52 adcroft 1.1
53     % stuff for psfrag
54 adcroft 1.8 %ph%\newcommand{\textinfigure}[1]{{\footnotesize\textbf{\textsf{#1}}}}
55     %ph%\newcommand{\mathinfigure}[1]{\small\ensuremath{{#1}}}
56 adcroft 1.1
57 adcroft 1.3 % This allows numbering of subsubsections
58     \setcounter{secnumdepth}{3}
59     % This changes the the chapter title
60     %\renewcommand{\chaptername}{Section}
61    
62 adcroft 1.11
63     % This allows hyperlinks in PDF
64     % hyperref package and colors for hyperref package
65     \usepackage{color}
66     \usepackage[dvips]{hyperref}
67     \definecolor{darkgreen}{rgb}{0,0.4,0}
68     \definecolor{darkblue}{rgb}{0,0,0.4}
69     \definecolor{darkred}{rgb}{0.5,0,0}
70     \hypersetup{breaklinks=true,
71     colorlinks=true,
72     linkcolor=darkgreen,
73     citecolor=darkblue,
74     pagecolor=darkred,
75     pdftitle={MITgcm Release 1 Documentation},
76     pdfauthor={support@mitgcm.org},
77     pdfkeywords={oceanography, ocean model, general circulation model,
78     non-hydrostatic, finite volume, inverse methods, adjoint method}
79     }
80 adcroft 1.1
81     \begin{document}
82 cnh 1.9
83     \bodytext{bgcolor="#FFFFFFFF"}
84 adcroft 1.1
85     \tableofcontents
86 adcroft 1.10 %\pagebreak
87 adcroft 1.1
88 adcroft 1.10 %\part{MIT GCM basics}
89 adcroft 1.3
90     % Section: Overview
91 adcroft 1.1 \input{part1/part1}
92 adcroft 1.8 %\pagebreak
93 adcroft 1.1
94 adcroft 1.3 % Section: Discretization and Algorithm
95 adcroft 1.1 \input{part2/part2}
96 adcroft 1.8 %\pagebreak
97 adcroft 1.1
98 adcroft 1.3 % Section: Getting started
99 adcroft 1.1 \input{part3/part3}
100 adcroft 1.8 %\pagebreak
101 adcroft 1.1
102 adcroft 1.3 % Section: Software Architecture
103 adcroft 1.1 \input{part4/part4}
104 adcroft 1.8 %\pagebreak
105 adcroft 1.1
106 adcroft 1.3
107 adcroft 1.10 %\part{Adjoint of the MIT GCM}
108 adcroft 1.3
109     % Section: Automatic Differentiation
110 adcroft 1.1 \input{part5/part5}
111 adcroft 1.8 %\pagebreak
112 adcroft 1.1
113 adcroft 1.3
114 adcroft 1.10 %\part{Additional features}
115 adcroft 1.3
116     % Section: Physical Packages
117 adcroft 1.1 \input{part6/part6}
118 adcroft 1.8 %\pagebreak
119 adcroft 1.1
120 adcroft 1.3 % Section: Diagnostics
121 adcroft 1.1 \input{part7/part7}
122 adcroft 1.8 %\pagebreak
123 adcroft 1.1
124 adcroft 1.3 % Section: ECCO Interface
125 adcroft 1.1 \input{part8/part8}
126 adcroft 1.8 %\pagebreak
127 adcroft 1.1
128 heimbach 1.5 % Section: References:
129 adcroft 1.10 %\markboth{BIBLIOGRAPHY}{BIBLIOGRAPHY}
130 heimbach 1.6 \addcontentsline{toc}{chapter}{BIBLIOGRAPHY}
131 adcroft 1.10 %aja%\bibliography{\BIBPATH/manual_references}
132     \bibliography{manual_references}
133 heimbach 1.6
134 adcroft 1.1 \end{document}

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