| 1 | jmc | 1.3 | C $Header: /u/gcmpack/MITgcm_contrib/verification_other/atm_gray/README,v 1.2 2013/05/08 23:56:57 jmc Exp $ | 
| 2 | jmc | 1.1 | C $Name:  $ | 
| 3 |  |  |  | 
| 4 |  |  | MITgcm_contrib/verification_other/atm_gray/ | 
| 5 |  |  |  | 
| 6 | jmc | 1.3 | Provide source code and input files for 3 simple sep-up, | 
| 7 | jmc | 1.2 | using gray atmospheric physics (O'Gorman and Schneider, JCl, 2008) | 
| 8 | jmc | 1.3 | plugged in MITgcm dynamical core (see package "atm_phys"). | 
| 9 | jmc | 1.1 |  | 
| 10 | jmc | 1.2 | Notes: Initially (before addition of pkg/atm_phys on 2013/05/08) was using | 
| 11 |  |  | modified (and original) "mypackage" src code and atmospheric gray physics | 
| 12 |  |  | code in dir atm_gray/code_gray ; this has now been replaced by pkg/atm_phys. | 
| 13 | jmc | 1.1 |  | 
| 14 | jmc | 1.3 | 1) standard cubed-sphere set-up (6 faces 32x32, 26 levels, non uniform deltaP) | 
| 15 |  |  | with 10m mixed layer depth (and evolving SST) + damping of stratospheric winds | 
| 16 |  |  | atm_gray/code/   : specific code | 
| 17 |  |  | atm_gray/input/  : input files (+ uses script "prepare_run" in input) | 
| 18 |  |  | atm_gray/results/output.txt : standard output of a short reference run | 
| 19 |  |  |  | 
| 20 |  |  | 2) simplified cubed-sphere set-up (6 faces 32x32, 25 levels, deltaP = 40.mb) | 
| 21 |  |  | with fixed (prescribed) SST. | 
| 22 | jmc | 1.1 | atm_gray/code_cs/ : specific code | 
| 23 |  |  | atm_gray/inp_cs/  : input files (+ uses script "prepare_run" in inp_cs) | 
| 24 |  |  | atm_gray/results/output.cs.txt : standard output of a short reference run | 
| 25 |  |  |  | 
| 26 | jmc | 1.3 | 3) lat-lon grid set-up (128x64 horiz grid, 25 levels | 
| 27 |  |  | <-> 2.8 x 2.8 degree, deltaP = 40.mb) | 
| 28 | jmc | 1.1 | atm_gray/code_ll/ : specific code | 
| 29 |  |  | atm_gray/inp_ll/  : input files | 
| 30 |  |  | atm_gray/results/output.ll.txt : standard output of a short reference run | 
| 31 |  |  |  | 
| 32 |  |  | -------------- | 
| 33 |  |  | Instructions: | 
| 34 |  |  | -------------- | 
| 35 |  |  | Download MITgcm (including verification experiments) from MITgcm repository | 
| 36 |  |  | <my_dir_space> cvs co -P -d MITgcm_current MITgcm | 
| 37 |  |  | and download "atm_gray" set-up from MITgcm_contrib repository, | 
| 38 |  |  | a) either directly in dir verification | 
| 39 |  |  | <my_dir_space> cd MITgcm_current/verification | 
| 40 |  |  | <verification> cvs co -P -d atm_gray MITgcm_contrib/verification_other/atm_gray | 
| 41 |  |  | or b) in a similar level in the directory tree, e.g., in verification_other in MITgcm_current: | 
| 42 |  |  | <my_dir_space> cd MITgcm_current | 
| 43 |  |  | <MITgcm_current> mkdir verification_other ; cd verification_other | 
| 44 |  |  | <verification_other> cvs co -P -d atm_gray MITgcm_contrib/verification_other/atm_gray | 
| 45 |  |  |  | 
| 46 | jmc | 1.3 | to built and run the 1rst (standard) CS-32 set-up: | 
| 47 |  |  | > cd atm_gray/build | 
| 48 |  |  | > (if done after a previous built, do "make Clean" first) | 
| 49 |  |  | > ../../../tools/genmake2 -mods ../code -of ../../../tools/build_options/[Selected-Option-File] | 
| 50 |  |  | > make depend | 
| 51 |  |  | > make | 
| 52 |  |  | > cd ../run | 
| 53 |  |  | > (if done after a previous run, clean-up all files: /bin/rm -f * ) | 
| 54 |  |  | > ln -s ../input/* . | 
| 55 |  |  | > ../input/prepare_run | 
| 56 |  |  | > ln -s ../build/mitgcmuv . | 
| 57 |  |  | > mitgcmuv >& output.txt | 
| 58 |  |  | and output.txt can be compared with atm_gray/results/output.txt | 
| 59 |  |  |  | 
| 60 |  |  | to built and run the 2nd (simplified) CS-32 set-up: | 
| 61 | jmc | 1.1 | > cd atm_gray/build | 
| 62 |  |  | > (if done after a previous built, do "make Clean" first) | 
| 63 |  |  | > ../../../tools/genmake2 -mods ../code_cs -of ../../../tools/build_options/[Selected-Option-File] | 
| 64 |  |  | > make depend | 
| 65 |  |  | > make | 
| 66 |  |  | > cd ../run | 
| 67 |  |  | > (if done after a previous run, clean-up all files: /bin/rm -f * ) | 
| 68 |  |  | > ln -s ../inp_cs/* . | 
| 69 |  |  | > ../inp_cs/prepare_run | 
| 70 |  |  | > ln -s ../build/mitgcmuv . | 
| 71 |  |  | > mitgcmuv >& output.txt | 
| 72 |  |  | and output.txt can be compared with atm_gray/results/output.cs.txt | 
| 73 |  |  |  | 
| 74 | jmc | 1.3 | to built and run the 3rd, Lat-Lon set-up: | 
| 75 | jmc | 1.1 | > cd atm_gray/build | 
| 76 |  |  | > (if done after a previous built, do "make Clean" first) | 
| 77 |  |  | > ../../../tools/genmake2 -mods ../code_ll -of ../../../tools/build_options/[Selected-Option-File] | 
| 78 |  |  | > make depend | 
| 79 |  |  | > make | 
| 80 |  |  | > cd ../run | 
| 81 |  |  | > (if done after a previous run, clean-up all files: /bin/rm -f * ) | 
| 82 |  |  | > ln -s ../inp_ll/* . | 
| 83 |  |  | > ln -s ../build/mitgcmuv . | 
| 84 |  |  | > mitgcmuv >& output.txt | 
| 85 |  |  | and output.txt can be compared with atm_gray/results/output.ll.txt | 
| 86 |  |  |  | 
| 87 |  |  | -------------- |