/[MITgcm]/MITgcm_contrib/test_scripts/sxace/mitgcmtestreport
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revision 1.4 by mlosch, Thu Feb 8 15:50:19 2018 UTC revision 1.5 by mlosch, Mon Mar 23 12:17:57 2020 UTC
# Line 4  Line 4 
4  # 1/ compiling on head node (tx7.awi.de), with -norun option  # 1/ compiling on head node (tx7.awi.de), with -norun option
5  # 2/ running on compute node (using PBS qsub), with -runonly option  # 2/ running on compute node (using PBS qsub), with -runonly option
6  # 3/ evaluating result on head node with -runonly option  # 3/ evaluating result on head node with -runonly option
7  #  #
8  # Notes:  # Notes:
9  # - step 2 leads to many error messages, because the OS on the compute  # - step 2 leads to many error messages, because the OS on the compute
10  #   nodes does not have the appropriate shell tools, modifying the  #   nodes does not have the appropriate shell tools, modifying the
11  #   runonly option to skip the evalution step would be nice but not  #   runonly option to skip the evalution step would be nice but not
# Line 96  fi Line 96  fi
96    
97  checkOut=2  checkOut=2
98    
99    gitcmd=$HOME/git/git
100  tmpFil=$TDIR/error.out  tmpFil=$TDIR/error.out
101  if [ $checkOut -le 1 ] ; then  if [ $checkOut -le 1 ] ; then
102    if test -e $TDIR/${gcmDIR}/doc ; then    if test -e $TDIR/${gcmDIR}/doc ; then
# Line 124  if [ $checkOut -ge 2 ] ; then Line 125  if [ $checkOut -ge 2 ] ; then
125      test -e $TDIR/${gcmDIR}  &&  rm -rf $TDIR/${gcmDIR}      test -e $TDIR/${gcmDIR}  &&  rm -rf $TDIR/${gcmDIR}
126      echo "  done"      echo "  done"
127      echo -n "Make a new clone of $git_code from repo: $git_repo ..."      echo -n "Make a new clone of $git_code from repo: $git_repo ..."
128      git clone https://github.com/$git_repo/${git_code}.git ${gcmDIR} 2> $tmpFil      ${gitcmd} clone https://github.com/$git_repo/${git_code}.git ${gcmDIR} 2> $tmpFil
129      retVal=$?      retVal=$?
130      if test $retVal = 0 ; then      if test $retVal = 0 ; then
131         echo ' --> done!'         echo ' --> done!'
# Line 137  if [ $checkOut -ge 2 ] ; then Line 138  if [ $checkOut -ge 2 ] ; then
138      fi      fi
139    else    else
140      echo "Updating current clone ( $git_code ) ..."      echo "Updating current clone ( $git_code ) ..."
141      ( cd ${gcmDIR}; git checkout master ; git pull )      ( cd ${gcmDIR}; ${gitcmd} checkout master ; ${gitcmd} pull )
142      echo ' --> done!'      retVal=$?
143        if test $retVal = 0 ; then
144            echo ' --> done!'
145        else
146            echo " Error: 'git pull' returned: $retVal"
147            echo " Error: 'git pull' returned: $retVal" \
148                | mail -s "Git-error on Stan" Martin.Losch@awi.de
149            exit 2
150        fi
151    fi    fi
152  else  else
153    cd $TDIR    cd $TDIR
# Line 186  qsub $HERE/$JOBSCRIPT Line 195  qsub $HERE/$JOBSCRIPT
195  # keep looking for the job in the job queues and wait until has disappeared  # keep looking for the job in the job queues and wait until has disappeared
196  jobruns=`qstat -n -u mlosch | grep "$JOBNAME"`  jobruns=`qstat -n -u mlosch | grep "$JOBNAME"`
197  while [ "${jobruns}"x != x ]  while [ "${jobruns}"x != x ]
198  do  do
199    sleep 200    sleep 200
200    jobruns=`qstat -n -u mlosch | grep "$JOBNAME"`    jobruns=`qstat -n -u mlosch | grep "$JOBNAME"`
201    echo "waiting for job ${jobruns%% *} ($JOBNAME) to complete"    echo "waiting for job ${jobruns%% *} ($JOBNAME) to complete"
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