| 1 |
mlosch |
1.1 |
#!/bin/bash -x |
| 2 |
|
|
|
| 3 |
|
|
# load latest compiler: |
| 4 |
|
|
module load sxf90/460 |
| 5 |
|
|
|
| 6 |
|
|
VENDOR=sxf90 |
| 7 |
|
|
RUNIT="runit_"$VENDOR |
| 8 |
|
|
HERE=`pwd` |
| 9 |
|
|
EXE='mpirun -np TR_NPROC ./mitgcmuv' |
| 10 |
|
|
NPROCS=2 |
| 11 |
|
|
MPI="-MPI $NPROCS" |
| 12 |
|
|
OUTFILE=/home/sx8/mlosch/out_${VENDOR} |
| 13 |
|
|
MYOUTPUT=/home/sx8/mlosch/testreport_${VENDOR} |
| 14 |
|
|
OUTFILE=out_${VENDOR} |
| 15 |
|
|
JOBNAME=testsx8 |
| 16 |
|
|
JOBSCRIPT=job_${VENDOR} |
| 17 |
|
|
#selectexperiment='-t exp2' |
| 18 |
|
|
selectexperiment='' |
| 19 |
|
|
# download code into this directory |
| 20 |
|
|
TDIR=/sx8/scr/mlosch/tmp_$VENDOR |
| 21 |
|
|
|
| 22 |
|
|
OPTFILE=../tools/build_options/SUPER-UX_SX-8_sxf90_awi |
| 23 |
|
|
|
| 24 |
|
|
RUNTESTREPORT="./testreport $MPI -of=${OPTFILE} $selectexperiment" |
| 25 |
|
|
# |
| 26 |
|
|
# create batch script |
| 27 |
|
|
# |
| 28 |
|
|
cat << EOF > $HERE/$JOBSCRIPT |
| 29 |
|
|
#PBS -q sx8-r # job queue not neccesary so far |
| 30 |
|
|
#PBS -N $JOBNAME # give the job a name |
| 31 |
|
|
#PBS -l cpunum_job=$NPROCS # cpus per node |
| 32 |
|
|
#PBS -l cputim_job=2:00:00 # time limit |
| 33 |
|
|
#PBS -l memsz_job=32gb # max accumulated memory, we need this much because of many netcdf files |
| 34 |
|
|
#PBS -j o # join i/o |
| 35 |
|
|
#PBS -S /bin/sh |
| 36 |
|
|
#PBS -o $OUTFILE # o Where to write output |
| 37 |
|
|
# |
| 38 |
|
|
|
| 39 |
|
|
cd \${PBS_O_WORKDIR} |
| 40 |
|
|
$RUNTESTREPORT -runonly -command "$EXE" >> $MYOUTPUT 2>&1 |
| 41 |
|
|
|
| 42 |
|
|
EOF |
| 43 |
|
|
|
| 44 |
|
|
# clean up old testreport output |
| 45 |
|
|
if [ -e $MYOUTPUT ]; then |
| 46 |
|
|
rm -rf $MYOUTPUT |
| 47 |
|
|
fi |
| 48 |
|
|
if [ -e $OUTFILE ]; then |
| 49 |
|
|
rm -r $OUTFILE |
| 50 |
|
|
fi |
| 51 |
|
|
if [ 0 = 0 ]; then |
| 52 |
|
|
# create directory and download code |
| 53 |
|
|
if [ -e $TDIR ]; then |
| 54 |
|
|
rm -rf $TDIR |
| 55 |
|
|
fi |
| 56 |
|
|
mkdir $TDIR |
| 57 |
|
|
cd $TDIR |
| 58 |
|
|
# cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_verif_basic >& cvs_co.log |
| 59 |
|
|
cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack co MITgcm >& cvs_co.log |
| 60 |
|
|
if [ $status > 0 ]; then |
| 61 |
|
|
cat cvs_co.log |
| 62 |
|
|
fi |
| 63 |
|
|
fi |
| 64 |
|
|
|
| 65 |
|
|
cd $TDIR/MITgcm/verification |
| 66 |
|
|
|
| 67 |
|
|
# make sure that we do not use the cross compiler for testreport |
| 68 |
|
|
unset CC |
| 69 |
|
|
# make sure that do use the cross compiler for testreport |
| 70 |
|
|
#export CC=sxcc |
| 71 |
|
|
|
| 72 |
|
|
$RUNTESTREPORT -j 8 -norun >> $MYOUTPUT 2>&1 |
| 73 |
|
|
|
| 74 |
|
|
if [ $status > 0 ]; then |
| 75 |
|
|
echo "something wrong with testreport" |
| 76 |
|
|
echo "keeping the working directory" |
| 77 |
|
|
#else |
| 78 |
|
|
# echo "check restarts" |
| 79 |
|
|
# echo ../tools/do_tst_2+2 -mpi -exe \"$HERE/$RUNIT\" -a NONE |
| 80 |
|
|
# ../tools/do_tst_2+2 -mpi -exe $HERE/$RUNIT -a NONE |
| 81 |
|
|
# everything OK: delete working directory |
| 82 |
|
|
# rm -rf $TDIR |
| 83 |
|
|
fi |
| 84 |
|
|
|
| 85 |
|
|
echo "job script looks like this:" > $MYOUTPUT |
| 86 |
|
|
cat $HERE/$JOBSCRIPT >> $MYOUTPUT |
| 87 |
|
|
echo "end of job script" >> $MYOUTPUT |
| 88 |
|
|
echo " " >> $MYOUTPUT |
| 89 |
|
|
|
| 90 |
|
|
# now submit the job that actually runs all the experiments in one go |
| 91 |
|
|
qsub $HERE/$JOBSCRIPT |
| 92 |
|
|
# keep looking for the job in the job queues and wait until has disappeared |
| 93 |
|
|
jobruns=`qstat -n -u mlosch | grep "$JOBNAME"` |
| 94 |
|
|
while [ "${jobruns}"x != x ] |
| 95 |
|
|
do |
| 96 |
|
|
sleep 20 |
| 97 |
|
|
jobruns=`qstat -n -u mlosch | grep "$JOBNAME"` |
| 98 |
|
|
done |
| 99 |
|
|
|
| 100 |
|
|
# after running the experiments on the compute node run testreport |
| 101 |
|
|
# for a third time to evaluate results on the head node again |
| 102 |
|
|
#$RUNTESTREPORT -match 10 -runonly |
| 103 |
|
|
$RUNTESTREPORT -match 10 -runonly \ |
| 104 |
|
|
-a "jmc@mitgcm.org, Martin.Losch@awi.de" >> $MYOUTPUT 2>&1 |
| 105 |
|
|
|
| 106 |
|
|
echo "end of mitgcmtestreport_split" |
Parent Directory
| 
Revision Log
| 
Revision Graph