| 1 |
#! /usr/bin/env bash |
| 2 |
|
| 3 |
# $Header: /u/gcmpack/MITgcm_contrib/test_scripts/other/test_local,v 1.12 2023/02/16 21:29:01 jmc Exp $ |
| 4 |
# $Name: $ |
| 5 |
|
| 6 |
#------------------------------------------------------------------------------- |
| 7 |
#-- process argument list: |
| 8 |
if test $# = 0 ; then |
| 9 |
echo 'need 1 argument' |
| 10 |
exit |
| 11 |
else |
| 12 |
if test $1 = ifort ; then |
| 13 |
# tst_list='iadm imp2 iur4' |
| 14 |
tst_list='iad4 imp2 iur4' |
| 15 |
dd1=`date +%d -d "1 day"` |
| 16 |
# if test $dd1 != '01' ; then echo 'not last day of month'; exit ; fi |
| 17 |
elif test $1 = gfort ; then |
| 18 |
tst_list='gadm gads gad4 gmp4 gmp2 gfo gfo4' |
| 19 |
# tst_list="$tst_list g77 g7a" |
| 20 |
elif test $1 = tap ; then |
| 21 |
tst_list='tapAD tapTL' |
| 22 |
elif test $1 = gfor8 ; then |
| 23 |
# tst_list='gadm gads gmp2 gmpi gfo g77' |
| 24 |
tst_list='gadm gads gmp2 gfo' |
| 25 |
elif test $1 = gfor4 ; then |
| 26 |
tst_list='gad4 gmp4 gfo4 g77' |
| 27 |
else |
| 28 |
tst_list=$* |
| 29 |
fi |
| 30 |
fi |
| 31 |
|
| 32 |
#------------------------------------------------------------------------------- |
| 33 |
#-- general setting + MITgcm ref clone update: |
| 34 |
# |
| 35 |
#- to get case insensitive "ls" (and order of tested experiments) |
| 36 |
#export LC_ALL="en_US.UTF-8" |
| 37 |
#- Turn off stack limit for FIZHI & AD-tests |
| 38 |
ulimit -s unlimited |
| 39 |
#- method to acces CVS: |
| 40 |
cmdCVS='cvs -d :pserver:cvsanon@mitgcm.org:/u/gcmpack -q' |
| 41 |
#- and which GitHub repository to use: |
| 42 |
git_repo='MITgcm'; git_code='MITgcm' |
| 43 |
#git_repo='altMITgcm'; #git_code='MITgcm66h' |
| 44 |
#- other settings: |
| 45 |
tmpFil="/tmp/"`basename $0`".$$" |
| 46 |
sendCmd='-a jm_c@mitgcm.org' |
| 47 |
sendCmd='-send scp -a jm_c@mitgcm.org:testing/MITgcm-test' |
| 48 |
|
| 49 |
gcmDIR="MITgcm" |
| 50 |
logFile='check_update.log' |
| 51 |
echo "-- run: \""`basename $0` $*"\" on:" `date` >> $logFile |
| 52 |
if test -e $gcmDIR/.git/config -a -f git_Hash ; then |
| 53 |
mv git_Hash prevHash |
| 54 |
( cd $gcmDIR ; git pull > /dev/null ) |
| 55 |
( cd $gcmDIR ; git rev-parse HEAD > ../git_Hash ) |
| 56 |
else |
| 57 |
echo " No current clone or missing file "git_Hash" ==> get a fresh clone" >> $logFile |
| 58 |
rm -f prevHash |
| 59 |
if test -d $gcmDIR ; then /bin/rm -rf $gcmDIR ; fi |
| 60 |
git clone https://github.com/$git_repo/${git_code}.git $gcmDIR |
| 61 |
( cd $gcmDIR ; git rev-parse HEAD > ../git_Hash ) |
| 62 |
fi |
| 63 |
|
| 64 |
#------------------------------------------------------------------------------- |
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#-- check particular set of tests: |
| 66 |
if test $1 = tap ; then |
| 67 |
#- Only run this pair of test if MITgcm code got updated: |
| 68 |
if test -f prevHash ; then |
| 69 |
#ls -l prevHash >> $logFile |
| 70 |
diff -q git_Hash prevHash > /dev/null 2>&1 |
| 71 |
retv=$? |
| 72 |
if test $retv = 0 ; then |
| 73 |
echo " No update in repos since previous test ==> skip '$1' set of tests" >> $logFile |
| 74 |
exit 0 |
| 75 |
else |
| 76 |
echo " Will run '$1' set of tests since repos has been updated" >> $logFile |
| 77 |
echo -n ' prevHash: ' >> $logFile |
| 78 |
cat prevHash >> $logFile |
| 79 |
echo -n ' git_Hash: ' >> $logFile |
| 80 |
cat git_Hash >> $logFile |
| 81 |
fi |
| 82 |
else |
| 83 |
echo " No file 'prevHash' --> will run '$1' set of tests" >> $logFile |
| 84 |
fi |
| 85 |
fi |
| 86 |
|
| 87 |
echo "run: \""`basename $0` $*"\" on:" `date` |
| 88 |
echo " tst_list='$tst_list'" |
| 89 |
|
| 90 |
#- to get ~/bin in the patch (for staf) when run on cron: |
| 91 |
if [ -d ~/bin ]; then |
| 92 |
echo 'add ~/bin to $PATH' |
| 93 |
export PATH=$PATH:~/bin |
| 94 |
#- and for Tapenade: |
| 95 |
echo $tst_list | grep '\<tap' > /dev/null 2>&1 ; retv=$? |
| 96 |
if test $retv = 0 ; then |
| 97 |
source ~jmc/bin/set_tapenade.sh |
| 98 |
fi |
| 99 |
fi |
| 100 |
|
| 101 |
#- for now, cannot mix ifort/gfortran tests: |
| 102 |
gfort=1 |
| 103 |
for tt in $tst_list |
| 104 |
do |
| 105 |
echo $tt | grep '^tap' > /dev/null 2>&1 ; retv=$? |
| 106 |
if [ $retv -ne 0 ] ; then |
| 107 |
echo $tt | grep '^g' > /dev/null 2>&1 ; retv=$? |
| 108 |
fi |
| 109 |
if [ $retv -eq 0 -a $gfort -ge 1 ] ; then gfort=2 |
| 110 |
elif [ $retv -ne 0 -a $gfort -le 1 ] ; then gfort=0 |
| 111 |
else echo 'cannot mix ifort/gfortran' ; exit |
| 112 |
fi |
| 113 |
done |
| 114 |
if [ $gfort -eq 0 ] ; then |
| 115 |
#echo 'source ~jmc/bin/intel_v14.sh' |
| 116 |
#source ~jmc/bin/intel_v14.sh |
| 117 |
echo 'source ~jmc/bin/intel_v15.sh' |
| 118 |
source ~jmc/bin/intel_v15.sh |
| 119 |
fi |
| 120 |
if [ $gfort -eq 2 ] ; then |
| 121 |
echo 'source ~jmc/bin/openmpi.sh' |
| 122 |
source ~jmc/bin/openmpi.sh |
| 123 |
fi |
| 124 |
|
| 125 |
#------------------------------------------------------------------------------- |
| 126 |
#-- Update & Run individual test: |
| 127 |
for tt in $tst_list |
| 128 |
do |
| 129 |
|
| 130 |
#- Clean and Update testing clone: --------------------------------------------- |
| 131 |
gcmDIR="MITgcm_$tt" |
| 132 |
echo "==========================================================================" |
| 133 |
# set -x |
| 134 |
rm -f tr_clean_$tt.log |
| 135 |
echo $tt | grep '^.ad' > /dev/null 2>&1 ; fwd=$? |
| 136 |
echo $tt | grep '^tap' > /dev/null 2>&1 ; tap=$? |
| 137 |
if test $tt = g7a -o $tap = 0 ; then fwd=0 ; clOpt='-adm' ; fi |
| 138 |
echo " testing tt= $tt , fwd= $fwd" |
| 139 |
if test -e $gcmDIR/.git/config -a -d $gcmDIR/verification ; then |
| 140 |
#- cleaning previous testreport run and updating the code: |
| 141 |
if [ $fwd -eq 0 ] ; then |
| 142 |
if test $tt = 'tapAD' ; then clOpt='-tap -adm' ; fi |
| 143 |
if test $tt = 'tapTL' ; then clOpt='-tap -tlm' ; fi |
| 144 |
set -x |
| 145 |
#- cleanup previous test: |
| 146 |
( cd $gcmDIR/verification ; ./testreport $clOpt -clean > ../../tr_clean_$tt.log 2>&1 ) |
| 147 |
set +x |
| 148 |
else |
| 149 |
set -x |
| 150 |
#- cleanup previous restart: |
| 151 |
( cd $gcmDIR/verification ; ../tools/do_tst_2+2 -clean > ../../tr_clean_$tt.log 2>&1 ) |
| 152 |
#- cleanup previous test: |
| 153 |
( cd $gcmDIR/verification ; ./testreport -clean >> ../../tr_clean_$tt.log 2>&1 ) |
| 154 |
set +x |
| 155 |
fi |
| 156 |
if [ $gfort -eq 0 ] ; then |
| 157 |
echo ' remove all Makefile_syntax' >> tr_clean_$tt.log |
| 158 |
( cd $gcmDIR/verification ; rm -f */build/Makefile_syntax ) |
| 159 |
fi |
| 160 |
echo "" >> tr_clean_$tt.log |
| 161 |
|
| 162 |
echo "==========================================================================" \ |
| 163 |
>> tr_clean_$tt.log |
| 164 |
echo " Update MITgcm code in dir: $gcmDIR using 'git pull':" | tee -a tr_clean_$tt.log |
| 165 |
set -x |
| 166 |
#- update the code: |
| 167 |
( cd $gcmDIR ; git pull ) >> tr_clean_$tt.log 2>&1 ; retv=$? |
| 168 |
set +x |
| 169 |
if test $retv != 0 ; then |
| 170 |
echo "'git pull' in $gcmDIR fail (return val=$retv) => skip" | tee -a tr_clean_$tt.log |
| 171 |
continue |
| 172 |
fi |
| 173 |
echo " and checkout master:" | tee -a tr_clean_$tt.log |
| 174 |
set -x |
| 175 |
( cd $gcmDIR ; git checkout master -- . ) >> tr_clean_$tt.log 2>&1 |
| 176 |
set +x |
| 177 |
else |
| 178 |
echo "Missing '$gcmDIR/.git/config' or dir '$gcmDIR/verification'" >> tr_clean_$tt.log |
| 179 |
if test -e $gcmDIR ; then |
| 180 |
echo -n " removing working copy: $gcmDIR ..." >> tr_clean_$tt.log |
| 181 |
rm -rf $gcmDIR |
| 182 |
echo " done" >> tr_clean_$tt.log |
| 183 |
fi |
| 184 |
#- download new code: |
| 185 |
echo "==========================================================================" \ |
| 186 |
>> tr_clean_$tt.log |
| 187 |
echo "Make a clone of $git_code from repo: $git_repo into: $gcmDIR ..." | tee -a tr_clean_$tt.log |
| 188 |
set -x |
| 189 |
git clone https://github.com/$git_repo/${git_code}.git $gcmDIR 2> $tmpFil |
| 190 |
retv=$? |
| 191 |
set +x |
| 192 |
if test $retv = 0 ; then |
| 193 |
echo ' done' >> tr_clean_$tt.log ; rm -f $tmpFil |
| 194 |
else |
| 195 |
echo "'git clone' into $gcmDIR failed (return: $retv) => skip" | tee -a tr_clean_$tt.log |
| 196 |
cat $tmpFil >> tr_clean_$tt.log ; rm -f $tmpFil |
| 197 |
continue |
| 198 |
fi |
| 199 |
fi |
| 200 |
echo "" |
| 201 |
echo "==========================================================================" |
| 202 |
|
| 203 |
if test -d $gcmDIR/verification ; then |
| 204 |
if test -e tr_run_$tt.log ; then mv -f tr_run_$tt.log tr_run_$tt.log_bak ; fi |
| 205 |
cd $gcmDIR/verification |
| 206 |
|
| 207 |
date |
| 208 |
# verbose mode: |
| 209 |
set -x |
| 210 |
pwd |
| 211 |
test -e tr_out.txt && mv -f tr_out.txt tr_out.sav |
| 212 |
|
| 213 |
#- Run test in corresponding clone: -------------------------------------------- |
| 214 |
case $tt in |
| 215 |
'iadm' ) |
| 216 |
|
| 217 |
./testreport -MPI 3 -adm -of ../tools/build_options/linux_amd64_ifort11 \ |
| 218 |
-devel -nc -ncad -repl_mk do_make_syntax.sh -obj -dd > ../../tr_run_$tt.log 2>&1 |
| 219 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 220 |
|
| 221 |
./testreport -MPI 3 -adm -of ../tools/build_options/linux_amd64_ifort11 \ |
| 222 |
-devel -q $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 223 |
|
| 224 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 225 |
;; |
| 226 |
|
| 227 |
'iad4' ) |
| 228 |
|
| 229 |
./testreport -MPI 3 -ur4 -adm -of ../tools/build_options/linux_amd64_ifort11 \ |
| 230 |
-devel -nc -ncad -repl_mk do_make_syntax.sh -obj -dd > ../../tr_run_$tt.log 2>&1 |
| 231 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 232 |
|
| 233 |
./testreport -MPI 3 -ur4 -adm -of ../tools/build_options/linux_amd64_ifort11 \ |
| 234 |
-devel -q -match 5 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 235 |
|
| 236 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 237 |
;; |
| 238 |
|
| 239 |
'imp2') |
| 240 |
|
| 241 |
export OMP_NUM_THREADS=2 |
| 242 |
export KMP_STACKSIZE=400m |
| 243 |
|
| 244 |
./testreport -MPI 2 -mth -of ../tools/build_options/linux_amd64_ifort11 \ |
| 245 |
-devel -nc -repl_mk do_make_syntax.sh -obj -dd > ../../tr_run_$tt.log 2>&1 |
| 246 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 247 |
|
| 248 |
./testreport -MPI 2 -mth -of ../tools/build_options/linux_amd64_ifort11 \ |
| 249 |
-devel -q $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 250 |
|
| 251 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 252 |
|
| 253 |
#- test restart: |
| 254 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 255 |
../tools/do_tst_2+2 -mpi $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 256 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 257 |
;; |
| 258 |
|
| 259 |
'iur4') |
| 260 |
|
| 261 |
./testreport -MPI 3 -ur4 -of ../tools/build_options/linux_amd64_ifort11 \ |
| 262 |
-devel -nc -repl_mk do_make_syntax.sh -obj -dd > ../../tr_run_$tt.log 2>&1 |
| 263 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 264 |
|
| 265 |
./testreport -MPI 3 -ur4 -of ../tools/build_options/linux_amd64_ifort11 \ |
| 266 |
-devel -q -match 5 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 267 |
|
| 268 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 269 |
|
| 270 |
#- test restart: |
| 271 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 272 |
../tools/do_tst_2+2 -mpi $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 273 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 274 |
;; |
| 275 |
|
| 276 |
'gadm') |
| 277 |
|
| 278 |
./testreport -MPI 3 -adm -of ../tools/build_options/linux_amd64_gfortran \ |
| 279 |
-devel -ncad -nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 280 |
|
| 281 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 282 |
;; |
| 283 |
|
| 284 |
'gads') |
| 285 |
|
| 286 |
./testreport -adm -of ../tools/build_options/linux_amd64_gfortran \ |
| 287 |
-devel -ncad -nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 288 |
|
| 289 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 290 |
;; |
| 291 |
|
| 292 |
'gad4') |
| 293 |
|
| 294 |
./testreport -adm -ur4 -of ../tools/build_options/linux_amd64_gfortran \ |
| 295 |
-devel -ncad -nc -match 5 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 296 |
|
| 297 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 298 |
;; |
| 299 |
|
| 300 |
'tapAD') |
| 301 |
|
| 302 |
./testreport -tap -adm -of ../tools/build_options/linux_amd64_gfortran \ |
| 303 |
$sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 304 |
|
| 305 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 306 |
;; |
| 307 |
|
| 308 |
'tapTL') |
| 309 |
|
| 310 |
./testreport -tap -tlm -of ../tools/build_options/linux_amd64_gfortran \ |
| 311 |
$sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 312 |
|
| 313 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 314 |
;; |
| 315 |
|
| 316 |
'g7a') |
| 317 |
|
| 318 |
./testreport -adm -of ../tools/build_options/linux_amd64_g77 \ |
| 319 |
-skd 'halfpipe_streamice' \ |
| 320 |
-nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 321 |
|
| 322 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 323 |
;; |
| 324 |
|
| 325 |
'gmp2') |
| 326 |
|
| 327 |
export OMP_NUM_THREADS=2 |
| 328 |
export GOMP_STACKSIZE=400m |
| 329 |
|
| 330 |
./testreport -MPI 2 -mth -of ../tools/build_options/linux_amd64_gfortran \ |
| 331 |
-devel -nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 332 |
|
| 333 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 334 |
|
| 335 |
#- test restart: |
| 336 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 337 |
../tools/do_tst_2+2 -mpi $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 338 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 339 |
;; |
| 340 |
|
| 341 |
'gmpi') |
| 342 |
|
| 343 |
./testreport -MPI 3 -of ../tools/build_options/linux_amd64_gfortran \ |
| 344 |
-devel -nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 345 |
|
| 346 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 347 |
|
| 348 |
#- test restart: |
| 349 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 350 |
../tools/do_tst_2+2 -mpi $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 351 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 352 |
;; |
| 353 |
|
| 354 |
'gmp4') |
| 355 |
|
| 356 |
./testreport -MPI 3 -ur4 -of ../tools/build_options/linux_amd64_gfortran \ |
| 357 |
-devel -nc -match 5 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 358 |
|
| 359 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 360 |
|
| 361 |
#- test restart: |
| 362 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 363 |
../tools/do_tst_2+2 -mpi $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 364 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 365 |
;; |
| 366 |
|
| 367 |
'gfo') |
| 368 |
|
| 369 |
./testreport -of ../tools/build_options/linux_amd64_gfortran \ |
| 370 |
-devel -nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 371 |
|
| 372 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 373 |
|
| 374 |
#- test restart: |
| 375 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 376 |
../tools/do_tst_2+2 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 377 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 378 |
;; |
| 379 |
|
| 380 |
'gfo4') |
| 381 |
|
| 382 |
./testreport -ur4 -of ../tools/build_options/linux_amd64_gfortran \ |
| 383 |
-devel -nc -match 5 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 384 |
|
| 385 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 386 |
|
| 387 |
#- test restart: |
| 388 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 389 |
../tools/do_tst_2+2 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 390 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 391 |
;; |
| 392 |
|
| 393 |
'g77') |
| 394 |
|
| 395 |
./testreport -of ../tools/build_options/linux_amd64_g77 \ |
| 396 |
-skd 'fizhi-cs-32x32x40 fizhi-cs-aqualev20 halfpipe_streamice internal_wave tutorial_advection_in_gyre' \ |
| 397 |
-nc $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 398 |
|
| 399 |
sed -n "/ email /,/^======== End of testreport / p" ../../tr_run_$tt.log |
| 400 |
|
| 401 |
#- test restart: |
| 402 |
echo '' >> ../../tr_run_$tt.log 2>&1 |
| 403 |
../tools/do_tst_2+2 $sendCmd >> ../../tr_run_$tt.log 2>&1 |
| 404 |
sed -n '/^===== Summary /,$ p' ../../tr_run_$tt.log |
| 405 |
;; |
| 406 |
|
| 407 |
*) echo "unrecognized test suffix '$tt' <== skipped" ;; |
| 408 |
esac |
| 409 |
|
| 410 |
set +x |
| 411 |
cd ../.. |
| 412 |
|
| 413 |
else |
| 414 |
echo "error: missing dir $gcmDIR/verification" |
| 415 |
fi |
| 416 |
|
| 417 |
done |
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