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jmc |
1.1 |
#! /usr/bin/env bash |
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jmc |
1.11 |
# $Header: /u/gcmpack/MITgcm_contrib/test_scripts/engaging/test_submit_engag,v 1.10 2021/04/20 04:31:39 jmc Exp $ |
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jmc |
1.1 |
# $Name: $ |
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today=`date +%Y%m%d` |
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dInWeek=`date +%a` |
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jmc |
1.9 |
#- select type of BATCH_SCRIPT to submit: |
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typ='' |
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if [ $# -ge 1 ] ; then |
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case $1 in |
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'c6'|'c7') typ=".$1" ; shift ;; |
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esac |
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fi |
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jmc |
1.1 |
if test $# = 0 |
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then |
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jmc |
1.11 |
TEST_LIST='gfoAdm ifcMpi ifcMp2 o64Adm o64Mpi gfoTlm' |
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jmc |
1.1 |
#if test "x$dInWeek" = xSun ; then TEST_LIST="$TEST_LIST iad ifc oad" ; fi |
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else |
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TEST_LIST=$* |
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fi |
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QSUB="/usr/bin/sbatch" |
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jmc |
1.10 |
#QLIST="/usr/bin/qstat -u $USER" |
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jmc |
1.6 |
QLIST="/usr/bin/squeue -u $USER" |
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jmc |
1.1 |
dNam='engaging' |
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HERE="$HOME/test_$dNam" |
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TST_DIR="/pool001/jm_c/test_$dNam" |
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logPfix='test_submit' |
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SUB_DIR="$HERE/engaging" |
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OUT_DIR="$HERE/output" |
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LOG_FIL="$OUT_DIR/$logPfix."`date +%m%d`".log" |
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jmc |
1.11 |
#SUB_DIR="$HERE/local" |
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jmc |
1.1 |
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#-- clean up old log files and start a new one: |
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cd $OUT_DIR |
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rm -f $logPfix.*.log_bak |
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if test -f $LOG_FIL ; then mv -f $LOG_FIL ${LOG_FIL}_bak ; fi |
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jmc |
1.3 |
echo -n '-- Starting: ' | tee -a $LOG_FIL |
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date | tee -a $LOG_FIL |
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jmc |
1.1 |
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n=$(( `ls $logPfix.*.log | wc -l` - 10 )) |
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if test $n -gt 0 ; then |
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jmc |
1.3 |
echo ' remove old log files:' | tee -a $LOG_FIL |
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ls -lt $logPfix.*.log | tail -"$n" | tee -a $LOG_FIL |
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jmc |
1.1 |
ls -t $logPfix.*.log | tail -"$n" | xargs rm -f |
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fi |
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jmc |
1.3 |
if test -f /etc/profile.d/modules.sh ; then |
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. /etc/profile.d/modules.sh |
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fi |
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module list >> $LOG_FIL 2>&1 |
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jmc |
1.1 |
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jmc |
1.2 |
#---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| |
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jmc |
1.1 |
#-- now really do something: |
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JOB_LIST=$TEST_LIST |
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NB_SUB_JOBS=0 |
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for i in $JOB_LIST |
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do |
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jmc |
1.8 |
sfx=`echo ${i} | sed -e 's/^.../&_/' -e 's/^o64/op64/' | tr '[:upper:]' '[:lower:]'` |
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jmc |
1.9 |
BATCH_SCRIPT="test_engag_${sfx}${typ}" |
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jmc |
1.1 |
if test -f $SUB_DIR/$BATCH_SCRIPT ; then |
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jmc |
1.6 |
#- job name ( $JOB ) & output-file name ( $JOB.std??? ) must match |
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# definition within $BATCH_SCRIPT slurm script |
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JOB="${i}_tst" |
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sJob=`printf "%8.8s" $JOB` #- squeue truncate name to only 1rst 8c |
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jmc |
1.10 |
#job_exist=`$QLIST | grep $JOB | wc -l` |
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jmc |
1.6 |
job_exist=`$QLIST | grep $sJob | wc -l` |
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jmc |
1.1 |
if test "x_$job_exist" = x_0 ; then |
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#-- move previous output file |
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outList=`ls $JOB.std??? 2> /dev/null` |
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if test "x$outList" != x ; then |
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jmc |
1.10 |
echo -n " moving job "$JOB" old output files:"| tee -a $LOG_FIL |
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jmc |
1.1 |
if test -d $OUT_DIR/prev ; then |
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for xx in $outList ; do |
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jmc |
1.3 |
pp=$OUT_DIR/prev/$xx ; echo -n " $xx" | tee -a $LOG_FIL |
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test -f $pp.sav && mv -f $pp.sav $pp.old |
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test -f $pp && mv -f $pp $pp.sav |
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chmod a+r $xx ; mv -f $xx $OUT_DIR/prev |
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jmc |
1.1 |
done |
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jmc |
1.3 |
echo " to dir ./prev" | tee -a $LOG_FIL |
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jmc |
1.1 |
else |
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jmc |
1.3 |
echo " <-- missing dir $OUT_DIR/prev" | tee -a $LOG_FIL |
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jmc |
1.1 |
fi |
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jmc |
1.2 |
else echo " no old output files from job '$JOB'" | tee -a $LOG_FIL |
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jmc |
1.1 |
fi |
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#-- submit job |
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jmc |
1.10 |
echo -n "--> $JOB : $BATCH_SCRIPT , " | tee -a $LOG_FIL |
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jmc |
1.3 |
$QSUB $SUB_DIR/$BATCH_SCRIPT | tee -a $LOG_FIL |
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jmc |
1.1 |
NB_SUB_JOBS=`expr $NB_SUB_JOBS + 1` |
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else |
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jmc |
1.3 |
echo "--> $JOB :" | tee -a $LOG_FIL |
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jmc |
1.7 |
$QLIST | grep $sJob | tee -a $LOG_FIL |
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jmc |
1.3 |
echo ' job already exist => skip this test' | tee -a $LOG_FIL |
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jmc |
1.1 |
fi |
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else |
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jmc |
1.3 |
echo 'no file:' $BATCH_SCRIPT 'to submit' | tee -a $LOG_FIL |
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jmc |
1.1 |
fi |
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done |
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jmc |
1.10 |
#echo "info-sub-list: NB_SUB_JOBS='$NB_SUB_JOBS'" >> $LOG_FIL |
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echo "Submitted $NB_SUB_JOBS jobs from dir: $SUB_DIR" | tee -a $LOG_FIL |
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jmc |
1.3 |
echo -n '-- Finished at: ' | tee -a $LOG_FIL |
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date | tee -a $LOG_FIL |
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jmc |
1.1 |
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#---+----1----+----2----+----3----+----4----+----5----+----6----+----7-|--+----| |
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exit 0 |
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