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dimitri |
1.5 |
Instructions for NCEP-flux-forced, 1/16-degree integration |
| 2 |
dimitri |
1.1 |
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| 3 |
dimitri |
1.5 |
# get the code from anonymous CVS server |
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# verification/global_with_exf is downloaded as a small test case |
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dimitri |
1.1 |
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cvs co MITgcm_contrib/quarter_degree_global |
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cvs co MITgcm_code |
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cvs co MITgcm/verification/global_with_exf |
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dimitri |
1.5 |
cvs co MITgcm/verification/tutorial_global_oce_latlon/input |
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dimitri |
1.1 |
cvs co MITgcm/verification/testreport |
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dimitri |
1.11 |
# running testreport in a small global domain to make sure code is complete |
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cd MITgcm/verification |
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./testreport |
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dimitri |
1.5 |
# Requires input files in sudirectory iter69 and run_template |
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# to be at same level as MITgcm and MITgcm_contrib. |
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# iter69 is available in lou:/u/dmenemen/ecco/iter69 |
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# and in pleiades:/nobackupp10/hzhang1/forcing/iter69 |
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# run_template is available in lou:/u/dmenemen/sixteen/run_template |
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# and in pleiades:/nobackupp10/dmenemen/sixteen/run_template |
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ln -sf /nobackupp10/hzhang1/forcing/iter69 . |
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dimitri |
1.9 |
ln -sf /nobackupp10/dmenemen/sixteen/run_template . |
| 24 |
dimitri |
1.5 |
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dimitri |
1.11 |
====================================================================== |
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# 5760x4352 3840-cpu (96x60)x(68x64) 1/16-deg integration on pleiades. |
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% compile code |
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cd MITgcm |
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mkdir bin exe |
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cd bin |
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\rm * |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/EXF_OPTIONS.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_16_3840 SIZE.h |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
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../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas |
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make depend |
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make -j 16 |
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% integrate code |
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cd ../exe |
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\rm * |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.exf . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.cal . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.kpp . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.pkg . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data_NCEP_16 data |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/eedata . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/job_pleiades_3840 . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/modpickup_16 modpickup |
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\ln -sf ../../run_template/pickup.0000285840.* . |
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\ln -sf ../../run_template/*.bin . |
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\ln -sf ../../run_template/LEV* . |
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\ln -sf ../../iter69/NCEP* . |
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\ln -sf ../../iter69/run* . |
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\cp ../bin/mitgcmuv mitgcmuv3840 |
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qsub job_pleiades_3840 |
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====================================================================== |
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# 5760x4352 1920-cpu (96x60)x(136x32) 1/16-deg integration on pleiades. |
| 66 |
dimitri |
1.1 |
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| 67 |
dimitri |
1.5 |
% compile code |
| 68 |
dimitri |
1.9 |
cd MITgcm |
| 69 |
dimitri |
1.1 |
mkdir bin exe |
| 70 |
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cd bin |
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\rm * |
| 72 |
dimitri |
1.5 |
\cp ../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/EXF_OPTIONS.h . |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_16_1920 SIZE.h |
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\cp ../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
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../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas |
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dimitri |
1.1 |
make depend |
| 79 |
dimitri |
1.5 |
make -j 16 |
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| 81 |
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% integrate code |
| 82 |
dimitri |
1.1 |
cd ../exe |
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\rm * |
| 84 |
dimitri |
1.5 |
\cp ../../MITgcm_contrib/quarter_degree_global/input/data.exf . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.cal . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.kpp . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data.pkg . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/data_NCEP_16 data |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/eedata . |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/job_pleiades . |
| 92 |
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\cp ../../MITgcm_contrib/quarter_degree_global/input/modpickup_16 modpickup |
| 93 |
dimitri |
1.10 |
\ln -sf ../../run_template/pickup.0000285840.* . |
| 94 |
dimitri |
1.7 |
\ln -sf ../../run_template/*.bin . |
| 95 |
dimitri |
1.10 |
\ln -sf ../../run_template/LEV* . |
| 96 |
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\ln -sf ../../iter69/NCEP* . |
| 97 |
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\ln -sf ../../iter69/run* . |
| 98 |
dimitri |
1.2 |
\cp ../bin/mitgcmuv mitgcmuv1920 |
| 99 |
dimitri |
1.5 |
qsub job_pleiades |
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