/[MITgcm]/MITgcm_contrib/quarter_degree_global/README.txt
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revision 1.24 by dimitri, Thu Dec 16 00:02:30 2004 UTC revision 1.26 by dimitri, Sat Dec 18 05:41:02 2004 UTC
# Line 10  cvs co MITgcm/verification/global_with_e Line 10  cvs co MITgcm/verification/global_with_e
10  cvs co MITgcm/verification/testreport  cvs co MITgcm/verification/testreport
11    
12    
13  ##########################################################################  #############################################################################
14  # mpi test of verification/global_with_exf on columbia  # 1-CPU verification/global_with_exf including pkg/diagnostics
15    
16    examples:
17    aim.5l_cs/input/data.diagnostics  fizhi-gridalt-hs/input/data.diagnostics
18    dome/input/data.diagnostics       hs94.cs-32x32x5/input/data.diagnostics
19    
20    e1=readbin('test_oldstyle/ETAtave.0000000018.data',[90 40]);
21    e2=readbin('ETAN.0000000018.data',[90 40]);
22    e16=readbin('test_oldstyle/Eta.0000000016.data',[90 40]);
23    e17=readbin('test_oldstyle/Eta.0000000017.data',[90 40]);
24    e18=readbin('test_oldstyle/Eta.0000000018.data',[90 40]);
25    minmax(e1-e2)
26    minmax(e2-(e16+e17+e18)/3)
27    
28    e1=readbin('test_oldstyle/sFluxtave.0000000018.data',[90 40]);
29    e2=readbin('SFLUX.0000000018.data',[90 40]);
30    minmax(e1-e2)
31    
32    e1=readbin('test_oldstyle/tFluxtave.0000000018.data',[90 40]);
33    e2=readbin('TFLUX.0000000018.data',[90 40]);
34    minmax(e1-e2)
35    
36    e1=readbin('TRELAX.0000000018.data',[90 40]);
37    subplot(211),mypcolor(e1');colorbar
38    
39    e1=readbin('SRELAX.0000000018.data',[90 40]);
40    subplot(211),mypcolor(e1');colorbar
41    
42    e1=readbin('TICE.0000000018.data',[90 40]);
43    subplot(211),mypcolor(e1');colorbar
44    
45    
46    e1=readbin('test_oldstyle/wVeltave.0000000018.data',[90 40 15]);
47    e2=readbin('WVEL.0000000018.data',[90 40 15]);
48    e16=readbin('test_oldstyle/W.0000000016.data',[90 40 15]);
49    e17=readbin('test_oldstyle/W.0000000017.data',[90 40 15]);
50    e18=readbin('test_oldstyle/W.0000000018.data',[90 40 15]);
51    minmax(e1-e2)
52    minmax(e2-(e16+e17+e18)/3)
53    
54    
55    
56    
57    
58    
59    cd MITgcm/verification/global_with_exf/build
60    \rm *
61    \cp ../code/* .
62    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf .
63    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h .
64    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h .
65    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h .
66    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test1 .
67    \mv SIZE.h_test1 SIZE.h
68    ../../../tools/genmake2
69    make depend
70    make -j
71    cd ..
72    mkdir run
73    cd run
74    \rm *
75    \cp ../build/mitgcmuv .
76    \ln -sf ../input/* .
77    \rm data
78    \cp ../../../../MITgcm_contrib/quarter_degree_global/input/data_test data
79    \cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.pkg .
80    \cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.kpp .
81    \cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics .
82    mitgcmuv >& output.txt
83    
84    
85    there is comparison output in
86    ../../../../MITgcm_contrib/quarter_degree_global/results/output.txt
87    
88    
89    #############################################################################
90    # mpi test verification/global_with_exf including pkg/diagnostics on columbia
91    
92  cd MITgcm/verification/global_with_exf/build  cd MITgcm/verification/global_with_exf/build
93  \rm *  \rm *
94  \cp ../code/* .  \cp ../code/* .
95    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf .
96  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h .  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h .
97  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h .  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h .
98  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test .  \cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test .
99  \mv SIZE.h_test SIZE.h  \mv SIZE.h_test SIZE.h
100  ../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
101  make depend  make depend
102  make -j 4  make -j
103  cd ..  cd ..
104  mkdir run  mkdir run
105  cd run  cd run
# Line 51  cd bin Line 128  cd bin
128  \cp ../../MITgcm_contrib/quarter_degree_global/code/* .  \cp ../../MITgcm_contrib/quarter_degree_global/code/* .
129  ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas  ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas
130  make depend  make depend
131  make -j 4  make -j
132  cd ../exe  cd ../exe
133  \rm *  \rm *
134  \cp ../bin/mitgcmuv .  \cp ../bin/mitgcmuv .
# Line 76  cd bin Line 153  cd bin
153  \cp SIZE.h_8_480 SIZE.h  \cp SIZE.h_8_480 SIZE.h
154  ../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix  ../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix
155  make depend  make depend
156  make -j 4  make -j
157  cd ../exe  cd ../exe
158  \rm *  \rm *
159  \cp ../bin/mitgcmuv .  \cp ../bin/mitgcmuv .
# Line 106  cd bin Line 183  cd bin
183  \cp SIZE.h_8_960 SIZE.h  \cp SIZE.h_8_960 SIZE.h
184  ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas  ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas
185  make depend  make depend
186  make -j 4  make -j
187    
188  cd ../exe  cd ../exe
189  \cp ../bin/mitgcmuv .  \cp ../bin/mitgcmuv .
# Line 148  mkdir tests Line 225  mkdir tests
225  mv STDOUT.0000 output.test1440 tests/stdout1440  mv STDOUT.0000 output.test1440 tests/stdout1440
226  \rm STD*  \rm STD*
227  mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \  mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \
228                   c17 480 runon 4-511 mitgcmuv1920 : \                   c17 480 runon 14-511 mitgcmuv1920 : \
229                   c18 480 runon 4-511 mitgcmuv1920 : \                   c18 480 runon 14-511 mitgcmuv1920 : \
230                   c19 480 runon 4-511 mitgcmuv1920 : \                   c19 480 runon 14-511 mitgcmuv1920 : \
231                   c20 480 runon 4-511 mitgcmuv1920   \                   c20 480 runon 14-511 mitgcmuv1920   \
232                              >&! output.test1920                              >&! output.test1920
233  mv STDOUT.0000 output.test1920 tests/stdout1920  mv STDOUT.0000 output.test1920 tests/stdout1920
234  \rm STD*  \rm STD*
# Line 159  mv STDOUT.0000 output.test1920 tests/std Line 236  mv STDOUT.0000 output.test1920 tests/std
236  scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe  scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe
237  scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe  scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe
238  scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe  scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe
239  mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \  /opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \
240                     -d /nobackup/menemenl/eighth/MITgcm/exe \
241                   c17 480 runon 9-511 mitgcmuv1920 : \                   c17 480 runon 9-511 mitgcmuv1920 : \
242                   c18 480 runon 9-511 mitgcmuv1920 : \                   c18 480 runon 9-511 mitgcmuv1920 : \
243                   c19 480 runon 9-511 mitgcmuv1920 : \                   c19 480 runon 9-511 mitgcmuv1920 : \
# Line 185  scp data columbia17:/nobackup/menemenl/e Line 263  scp data columbia17:/nobackup/menemenl/e
263  scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe  scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe
264  mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \  mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \
265                   c17 480 runon 9-511 mitgcmuv1440 : \                   c17 480 runon 9-511 mitgcmuv1440 : \
266                   c19 480 runon 9-511 mitgcmuv1440 : \                   c18 480 runon 9-511 mitgcmuv1440 : \
267                   c20 480 runon 9-511 mitgcmuv1440   \                   c19 480 runon 9-511 mitgcmuv1440   \
268                              >&! output.run                              >&! output.run
269    
270    
# Line 233  fails: Line 311  fails:
311  <   viscA4GridMin=2e-3,  <   viscA4GridMin=2e-3,
312  <   viscA4GridMax=1e-2,  <   viscA4GridMax=1e-2,
313  <   viscC4Leith=0.2,  <   viscC4Leith=0.2,
314  try:  fails:
315  <   viscA4GridMin=4e-3,  <   viscA4GridMin=4e-3,
316  <   viscA4GridMax=8e-3,  <   viscA4GridMax=8e-3,
317  <   viscC4Leith=0.2,  <   viscC4Leith=0.2,
318    fails:
319      viscA4GridMin=5e-3,
320      viscA4GridMax=1e-2,
321      viscC4Leith=.2,
322    starting with time step 50112, try:
323    (this mean day 174 becomes day 116)
324      viscA4GridMin=6.e-4,
325      viscA4GridMax=8.e-3,
326      viscC4Leith=0.1,
327      deltat=200
328    
329    
330  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Line 284  WRITE_CHECKPOINT    364      332      86 Line 371  WRITE_CHECKPOINT    364      332      86
371    
372    
373    
374                      240-CPU  480-CPU  960-CPU  1440-CPU  CPU                 240     480     960     1440    1920
375  -------------------------------------------------------  -------------------------------------------------------------
376  MAIN LOOP           5066     2917     2227     1551  MAIN LOOP           5066    2917    2227    1551    1276
377  EXF_GETFORCING      38       33       126      60  EXF_GETFORCING      38      33      126     60      83
378  DO_OCEANIC_PHYS     1272     619      320      390  DO_OCEANIC_PHYS     1272    619     320     390     186
379  STATEKPP            532      265      138      181  STATEKPP            532     265     138     181     77
380  KPPMIX              374      188      98       112  KPPMIX              374     188     98      112     53
381  DYNAMICS            1429     718      313      319  DYNAMICS            1429    718     313     319     173
382  SOLVE_FOR_PRESSURE  206      119      483      169  SOLVE_FOR_PRESSURE  206     119     483     169     310
383  BLOCKING_EXCHANGES  115      70       53       29  BLOCKING_EXCHANGES  115     70      53      29      28
384  THERMODYNAMICS      1100     582      294      279  THERMODYNAMICS      1100    582     294     279     172
385  DO_THE_MODEL_IO     177      156      131      202  DO_THE_MODEL_IO     177     156     131     202     155
386  WRITE_CHECKPOINT    333      332      302      524  WRITE_CHECKPOINT    333     332     302     524     352
387    
388    
389    4 clusters
390    Dec 16 08:17 Ttave.0000051840.data
391    Dec 16 08:47 Ttave.0000053136.data
392    Dec 16 09:17 Ttave.0000054432.data
393    Dec 16 09:53 Ttave.0000055728.data
394    Dec 17 14:08 Ttave.0000075168.data
395    Dec 17 14:33 Ttave.0000076464.data
396    Dec 17 14:58 Ttave.0000077760.data
397    Dec 17 15:29 Ttave.0000079056.data
398    
399    1 cluster
400    Dec 16 22:14 Ttave.0000059616.data
401    Dec 16 23:16 Ttave.0000060912.data
402    Dec 17 00:19 Ttave.0000062208.data
403    Dec 17 01:27 Ttave.0000063504.data
404    Dec 17 02:29 Ttave.0000064800.data
405    Dec 17 03:31 Ttave.0000066096.data
406    Dec 17 04:39 Ttave.0000067392.data
407    Dec 17 05:42 Ttave.0000068688.data
408    Dec 17 06:44 Ttave.0000069984.data
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