10 |
cvs co MITgcm/verification/testreport |
cvs co MITgcm/verification/testreport |
11 |
|
|
12 |
|
|
13 |
########################################################################## |
############################################################################# |
14 |
# mpi test of verification/global_with_exf on columbia |
# 1-CPU verification/global_with_exf including pkg/diagnostics |
15 |
|
|
16 |
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cd MITgcm/verification/global_with_exf/build |
17 |
|
\rm * |
18 |
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\cp ../code/* . |
19 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
20 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
21 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
22 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h . |
23 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test1 . |
24 |
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\mv SIZE.h_test1 SIZE.h |
25 |
|
../../../tools/genmake2 |
26 |
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make depend |
27 |
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make -j |
28 |
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cd .. |
29 |
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mkdir run |
30 |
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cd run |
31 |
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\rm * |
32 |
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\cp ../build/mitgcmuv . |
33 |
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\ln -sf ../input/* . |
34 |
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\rm data |
35 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data_test data |
36 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.pkg . |
37 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.kpp . |
38 |
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\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics . |
39 |
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mitgcmuv >& output.txt |
40 |
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|
41 |
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|
42 |
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there is comparison output in |
43 |
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../../../../MITgcm_contrib/quarter_degree_global/results/output.txt |
44 |
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45 |
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|
46 |
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############################################################################# |
47 |
|
# mpi test verification/global_with_exf including pkg/diagnostics on columbia |
48 |
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|
49 |
cd MITgcm/verification/global_with_exf/build |
cd MITgcm/verification/global_with_exf/build |
50 |
\rm * |
\rm * |
51 |
\cp ../code/* . |
\cp ../code/* . |
52 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
53 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
54 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
55 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test . |
56 |
\mv SIZE.h_test SIZE.h |
\mv SIZE.h_test SIZE.h |
57 |
../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
58 |
make depend |
make depend |
59 |
make -j 4 |
make -j |
60 |
cd .. |
cd .. |
61 |
mkdir run |
mkdir run |
62 |
cd run |
cd run |
85 |
\cp ../../MITgcm_contrib/quarter_degree_global/code/* . |
\cp ../../MITgcm_contrib/quarter_degree_global/code/* . |
86 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
87 |
make depend |
make depend |
88 |
make -j 4 |
make -j |
89 |
cd ../exe |
cd ../exe |
90 |
\rm * |
\rm * |
91 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
110 |
\cp SIZE.h_8_480 SIZE.h |
\cp SIZE.h_8_480 SIZE.h |
111 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix |
../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix |
112 |
make depend |
make depend |
113 |
make -j 4 |
make -j |
114 |
cd ../exe |
cd ../exe |
115 |
\rm * |
\rm * |
116 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
140 |
\cp SIZE.h_8_960 SIZE.h |
\cp SIZE.h_8_960 SIZE.h |
141 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
142 |
make depend |
make depend |
143 |
make -j 4 |
make -j |
144 |
|
|
145 |
cd ../exe |
cd ../exe |
146 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
148 |
\ln -sf ../../iter69/* . |
\ln -sf ../../iter69/* . |
149 |
\cp data.exf_clim_8 data.exf_clim |
\cp data.exf_clim_8 data.exf_clim |
150 |
\cp data_SIO_8 data |
\cp data_SIO_8 data |
151 |
modpickup_8 |
modpickup_8 |
152 |
mpirun -v -a a2k c18 480 runon 4-483 mitgcmuv : c20 480 runon 4-483 mitgcmuv |
|
153 |
mpirun -v -a a2k c18 508 runon 4-511 mitgcmuv : c20 508 runon 4-511 mitgcmuv |
/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \ |
154 |
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-d /nobackup/menemenl/eighth/MITgcm/exe \ |
155 |
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c19 480 runon 11-490 mitgcmuv960 : \ |
156 |
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c18 480 runon 11-490 mitgcmuv960 \ |
157 |
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>&! output.run & |
158 |
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|
159 |
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mpirun -v -a a2k c18 480 runon 11-490 mitgcmuv : c20 480 runon 11-490 mitgcmuv |
160 |
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mpirun -v -a a2k c18 508 runon 11-490 mitgcmuv : c20 508 runon 11-490 mitgcmuv |
161 |
|
|
162 |
on columbia18: |
on columbia18: |
163 |
ln -sf /nobackup18/menemenl/eighth /tmp/eighth |
ln -sf /nobackup18/menemenl/eighth /tmp/eighth |
173 |
\cp data_SIO_8 data |
\cp data_SIO_8 data |
174 |
\ln -sf /tmp/eighth/MITgcm/exe/pick* . |
\ln -sf /tmp/eighth/MITgcm/exe/pick* . |
175 |
|
|
176 |
mpirun -v -a a2k -d /tmp/eighth/MITgcm/exe c18 480 runon 4-511 mitgcmuv960 : c20 480 runon 4-511 mitgcmuv960 >&! output.txt & |
mpirun -v -a a2k -d /tmp/eighth/MITgcm/exe c18 480 runon 11-490 mitgcmuv960 : \ |
177 |
|
c20 480 runon 11-490 mitgcmuv960 >&! output.txt & |
178 |
|
|
179 |
|
\cp data.test data |
180 |
|
scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe |
181 |
|
scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
182 |
|
scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe |
183 |
|
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
184 |
|
c18 480 runon 11-490 mitgcmuv1440 : \ |
185 |
|
c19 480 runon 11-490 mitgcmuv1440 : \ |
186 |
|
c20 480 runon 11-490 mitgcmuv1440 \ |
187 |
|
>&! output.test1440 |
188 |
|
mkdir tests |
189 |
|
mv STDOUT.0000 output.test1440 tests/stdout1440 |
190 |
|
\rm STD* |
191 |
|
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
192 |
|
c17 480 runon 11-490 mitgcmuv1920 : \ |
193 |
|
c18 480 runon 11-490 mitgcmuv1920 : \ |
194 |
|
c19 480 runon 11-490 mitgcmuv1920 : \ |
195 |
|
c20 480 runon 11-490 mitgcmuv1920 \ |
196 |
|
>&! output.test1920 |
197 |
|
mv STDOUT.0000 output.test1920 tests/stdout1920 |
198 |
|
\rm STD* |
199 |
|
\cp data.run data |
200 |
|
scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe |
201 |
|
scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
202 |
|
scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe |
203 |
|
/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \ |
204 |
|
-d /nobackup/menemenl/eighth/MITgcm/exe \ |
205 |
|
c17 480 runon 11-490 mitgcmuv1920 : \ |
206 |
|
c18 480 runon 11-490 mitgcmuv1920 : \ |
207 |
|
c19 480 runon 11-490 mitgcmuv1920 : \ |
208 |
|
c20 480 runon 11-490 mitgcmuv1920 \ |
209 |
|
>&! output.run & |
210 |
|
|
211 |
|
|
212 |
|
|
213 |
|
|
214 |
|
\cp data.test data |
215 |
|
scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
216 |
|
scp data columbia20:/nobackup/menemenl/eighth/MITgcm/exe |
217 |
|
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
218 |
|
c18 480 runon 9-511 mitgcmuv1440 : \ |
219 |
|
c19 480 runon 9-511 mitgcmuv1440 : \ |
220 |
|
c20 480 runon 9-511 mitgcmuv1440 \ |
221 |
|
>&! output.test1440 |
222 |
|
mkdir tests |
223 |
|
mv STDOUT.0000 output.test1440 tests/stdout1440 |
224 |
|
\rm STD* |
225 |
|
\cp data.run data |
226 |
|
scp data columbia17:/nobackup/menemenl/eighth/MITgcm/exe |
227 |
|
scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
228 |
|
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
229 |
|
c17 480 runon 9-511 mitgcmuv1440 : \ |
230 |
|
c18 480 runon 9-511 mitgcmuv1440 : \ |
231 |
|
c19 480 runon 9-511 mitgcmuv1440 \ |
232 |
|
>&! output.run |
233 |
|
|
234 |
|
|
235 |
|
|
236 |
|
|
275 |
< viscA4GridMin=2e-3, |
< viscA4GridMin=2e-3, |
276 |
< viscA4GridMax=1e-2, |
< viscA4GridMax=1e-2, |
277 |
< viscC4Leith=0.2, |
< viscC4Leith=0.2, |
278 |
try: |
fails: |
279 |
< viscA4GridMin=4e-3, |
< viscA4GridMin=4e-3, |
280 |
< viscA4GridMax=8e-3, |
< viscA4GridMax=8e-3, |
281 |
< viscC4Leith=0.2, |
< viscC4Leith=0.2, |
282 |
|
fails: |
283 |
|
viscA4GridMin=5e-3, |
284 |
|
viscA4GridMax=1e-2, |
285 |
|
viscC4Leith=.2, |
286 |
|
starting with time step 50112, try: |
287 |
|
(this mean day 174 becomes day 116) |
288 |
|
viscA4GridMin=6.e-4, |
289 |
|
viscA4GridMax=8.e-3, |
290 |
|
viscC4Leith=0.1, |
291 |
|
deltat=200 |
292 |
|
|
293 |
|
|
294 |
%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
318 |
c18 intel-comp.8.0.070 |
c18 intel-comp.8.0.070 |
319 |
480-CPU default mpt.1.11-85 |
480-CPU default mpt.1.11-85 |
320 |
c19 default |
c19 default |
321 |
c17 default |
c17 default, other processes |
322 |
|
c19 new |
323 |
------------------------------------------------------------------------- |
------------------------------------------------------------------------- |
324 |
MAIN LOOP 4024 2917 5379 8895 |
MAIN LOOP 4024 2917 5379 8895 3571 |
325 |
EXF_GETFORCING 218 33 880 261 |
EXF_GETFORCING 218 33 880 261 227 |
326 |
DO_OCEANIC_PHYS 622 619 621 913 |
DO_OCEANIC_PHYS 622 619 621 913 620 |
327 |
STATEKPP 269 265 268 310 |
STATEKPP 269 265 268 310 265 |
328 |
KPPMIX 190 188 189 291 |
KPPMIX 190 188 189 291 189 |
329 |
DYNAMICS 747 718 745 1456 |
DYNAMICS 747 718 745 1456 714 |
330 |
SOLVE_FOR_PRESSURE 966 119 1703 2748 |
SOLVE_FOR_PRESSURE 966 119 1703 2748 900 |
331 |
BLOCKING_EXCHANGES 64 70 392 375 |
BLOCKING_EXCHANGES 64 70 392 375 70 |
332 |
THERMODYNAMICS 553 582 566 1510 |
THERMODYNAMICS 553 582 566 1510 584 |
333 |
DO_THE_MODEL_IO 178 156 149 184 |
DO_THE_MODEL_IO 178 156 149 184 152 |
334 |
WRITE_CHECKPOINT 364 332 864 420 |
WRITE_CHECKPOINT 364 332 864 420 333 |
335 |
|
|
336 |
|
|
337 |
|
|
338 |
240-CPU 480-CPU 960-CPU |
CPU 240 480 960 1440 1920 |
339 |
------------------------------------------------ |
------------------------------------------------------------- |
340 |
MAIN LOOP 5066 2917 2227 |
MAIN LOOP 5066 2917 2227 1551 1276 |
341 |
EXF_GETFORCING 38 33 126 |
EXF_GETFORCING 38 33 126 60 83 |
342 |
DO_OCEANIC_PHYS 1272 619 320 |
DO_OCEANIC_PHYS 1272 619 320 390 186 |
343 |
STATEKPP 532 265 138 |
STATEKPP 532 265 138 181 77 |
344 |
KPPMIX 374 188 98 |
KPPMIX 374 188 98 112 53 |
345 |
DYNAMICS 1429 718 313 |
DYNAMICS 1429 718 313 319 173 |
346 |
SOLVE_FOR_PRESSURE 206 119 483 |
SOLVE_FOR_PRESSURE 206 119 483 169 310 |
347 |
BLOCKING_EXCHANGES 115 70 53 |
BLOCKING_EXCHANGES 115 70 53 29 28 |
348 |
THERMODYNAMICS 1100 582 294 |
THERMODYNAMICS 1100 582 294 279 172 |
349 |
DO_THE_MODEL_IO 177 156 131 |
DO_THE_MODEL_IO 177 156 131 202 155 |
350 |
WRITE_CHECKPOINT 333 332 302 |
WRITE_CHECKPOINT 333 332 302 524 352 |
351 |
|
|
352 |
|
|
353 |
|
4 clusters timeave |
354 |
|
Dec 16 08:17 Ttave.0000051840.data |
355 |
|
Dec 16 08:47 Ttave.0000053136.data |
356 |
|
Dec 16 09:17 Ttave.0000054432.data |
357 |
|
Dec 16 09:53 Ttave.0000055728.data |
358 |
|
Dec 17 14:08 Ttave.0000075168.data |
359 |
|
Dec 17 14:33 Ttave.0000076464.data |
360 |
|
Dec 17 14:58 Ttave.0000077760.data |
361 |
|
Dec 17 15:29 Ttave.0000079056.data |
362 |
|
|
363 |
|
1 cluster timeave |
364 |
|
Dec 16 22:14 Ttave.0000059616.data |
365 |
|
Dec 16 23:16 Ttave.0000060912.data |
366 |
|
Dec 17 00:19 Ttave.0000062208.data |
367 |
|
Dec 17 01:27 Ttave.0000063504.data |
368 |
|
Dec 17 02:29 Ttave.0000064800.data |
369 |
|
Dec 17 03:31 Ttave.0000066096.data |
370 |
|
Dec 17 04:39 Ttave.0000067392.data |
371 |
|
Dec 17 05:42 Ttave.0000068688.data |
372 |
|
Dec 17 06:44 Ttave.0000069984.data |
373 |
|
|
374 |
|
2 cluster timeave |
375 |
|
Dec 17 21:19 Ttave.0000086832.data |
376 |
|
Dec 17 21:55 Ttave.0000088128.data 36 |
377 |
|
Dec 17 22:30 Ttave.0000089424.data 35 |
378 |
|
Dec 17 23:12 Ttave.0000090720.data 42 |
379 |
|
Dec 17 23:47 Ttave.0000092016.data 35 |
380 |
|
Dec 18 00:23 Ttave.0000093312.data 36 |
381 |
|
Dec 18 01:04 Ttave.0000094608.data 41 |
382 |
|
Dec 18 01:39 Ttave.0000095904.data 35 |
383 |
|
|
384 |
|
2 cluster diagnostics |
385 |
|
Dec 18 02:26 THETA.0000086832.data |
386 |
|
Dec 18 03:05 THETA.0000088128.data 39 |
387 |
|
Dec 18 03:43 THETA.0000089424.data 38 |
388 |
|
Dec 18 04:27 THETA.0000090720.data 44 |
389 |
|
Dec 18 05:06 THETA.0000092016.data 39 |
390 |
|
Dec 18 05:45 THETA.0000093312.data 39 |
391 |
|
Dec 18 06:29 THETA.0000094608.data 44 |
392 |
|
Dec 18 07:08 THETA.0000095904.data 39 |
393 |
|
|
394 |
|
|
395 |
|
%%%%%%%%%%%%%%%%% |
396 |
|
|
397 |
|
|
398 |
|
|
399 |
|
e1=readbin('test_oldstyle/ETAtave.0000000018.data',[90 40]); |
400 |
|
e2=readbin('ETAN.0000000018.data',[90 40]); |
401 |
|
e16=readbin('test_oldstyle/Eta.0000000016.data',[90 40]); |
402 |
|
e17=readbin('test_oldstyle/Eta.0000000017.data',[90 40]); |
403 |
|
e18=readbin('test_oldstyle/Eta.0000000018.data',[90 40]); |
404 |
|
minmax(e1-e2) |
405 |
|
minmax(e2-(e16+e17+e18)/3) |
406 |
|
|
407 |
|
e1=readbin('test_oldstyle/sFluxtave.0000000018.data',[90 40]); |
408 |
|
e2=readbin('SFLUX.0000000018.data',[90 40]); |
409 |
|
minmax(e1-e2) |
410 |
|
|
411 |
|
e1=readbin('test_oldstyle/tFluxtave.0000000018.data',[90 40]); |
412 |
|
e2=readbin('TFLUX.0000000018.data',[90 40]); |
413 |
|
minmax(e1-e2) |
414 |
|
|
415 |
|
e1=readbin('TRELAX.0000000018.data',[90 40]); |
416 |
|
subplot(211),mypcolor(e1');colorbar |
417 |
|
|
418 |
|
e1=readbin('SRELAX.0000000018.data',[90 40]); |
419 |
|
subplot(211),mypcolor(e1');colorbar |
420 |
|
|
421 |
|
e1=readbin('TICE.0000000018.data',[90 40]); |
422 |
|
subplot(211),mypcolor(e1');colorbar |
423 |
|
|
424 |
|
|
425 |
|
e1=readbin('test_oldstyle/wVeltave.0000000018.data',[90 40 15]); |
426 |
|
e2=readbin('WVEL.0000000018.data',[90 40 15]); |
427 |
|
e16=readbin('test_oldstyle/W.0000000016.data',[90 40 15]); |
428 |
|
e17=readbin('test_oldstyle/W.0000000017.data',[90 40 15]); |
429 |
|
e18=readbin('test_oldstyle/W.0000000018.data',[90 40 15]); |
430 |
|
minmax(e1-e2) |
431 |
|
minmax(e2-(e16+e17+e18)/3) |