/[MITgcm]/MITgcm_contrib/quarter_degree_global/README.txt
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revision 1.1 by dimitri, Tue Nov 9 22:02:51 2004 UTC revision 1.13 by dimitri, Mon Dec 13 05:40:39 2004 UTC
# Line 6  forced 1. by NCEP fields and 2. by SIO f Line 6  forced 1. by NCEP fields and 2. by SIO f
6    
7  cvs co MITgcm_contrib/quarter_degree_global  cvs co MITgcm_contrib/quarter_degree_global
8  cvs co MITgcm_code  cvs co MITgcm_code
9    cvs co MITgcm/verification/global_with_exf
10    cvs co MITgcm/verification/testreport
11    
12    
13  ##########################################################################  ##########################################################################
14  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # mpi test of verification/global_with_exf on columbia
 # requires input files in sudirectories run_template and ncep_rgau  
 # these can be obained from lou:/u/menemenl/cube  
   
 cd MITgcm/verification/global_ocean.cs32x15/code  
 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  
 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  
 \cp SIZE.h_216 SIZE.h  
 \cp packages.conf_hr packages.conf  
15    
16  cd ../build  cd MITgcm/verification/global_with_exf/build
17  \rm *  \rm *
18  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  \cp ../code/* .
19    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h .
20    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h .
21    \cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test .
22    \mv SIZE.h_test SIZE.h
23    ../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
24  make depend  make depend
25  make -j 16  make -j 4
   
26  cd ..  cd ..
27  mkdir run  mkdir run
28  cd run  cd run
29  \rm *  \rm *
30  \cp ../input/* .  \cp ../build/mitgcmuv .
31  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \ln -sf ../input/* .
32  qsub job_altix92  \rm data
33    \cp ../../../../MITgcm_contrib/quarter_degree_global/input/data_test data
34    mpirun -np 2 mitgcmuv
35    
36    there is comparison output in
37    ../../../../MITgcm_contrib/quarter_degree_global/results/STDOUT.0000
38    
39    
40    ##########################################################################
41    # 1440x1088 204-cpu (120x12)x(64x17) 1/4-deg integration on altix with efc
42    # requires input files in sudirectory iter69 to be at same level as MITgcm
43    # and MITgcm_contrib.  A copy of iter69 resides on columbia10:/nobackup10
44    # The integration length is 4018 days, 1992-2002.
45    # First three days need to be integrated using deltat=200.
46    
47    cd MITgcm
48    mkdir bin exe
49    cd bin
50    \rm *
51    \cp ../../MITgcm_contrib/quarter_degree_global/code/* .
52    ../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix
53    make depend
54    make -j 4
55    cd ../exe
56    \rm *
57    \cp ../bin/mitgcmuv .
58    \cp ../../MITgcm_contrib/quarter_degree_global/input/* .
59    \ln -sf ../../iter69/* .
60    qsub job_altix
61    
62    
63    ##########################################################################
64    # 2880x2176 480-cpu (96x30)x(136x16) 1/4-deg integration on altix with efc
65    # requires input files in sudirectory iter69 to be at same level as MITgcm
66    # and MITgcm_contrib.  A copy of iter69 with 1/8-deg files resides on
67    # columbia18:/nobackup18/menemenl/eight.
68    # The integration length is 3 days.
69    # First three days need to be integrated using deltat=100.
70    
71    cd MITgcm
72    mkdir bin exe
73    cd bin
74    \rm *
75    \cp ../../MITgcm_contrib/quarter_degree_global/code/* .
76    \cp SIZE.h_8_480 SIZE.h
77    ../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix
78    make depend
79    make -j 4
80    cd ../exe
81    \rm *
82    \cp ../bin/mitgcmuv .
83    \cp ../../MITgcm_contrib/quarter_degree_global/input/* .
84    \ln -sf ../../iter69/* .
85    \cp data.exf_clim_8 data.exf_clim
86    \cp data_SIO_8 data
87    qsub job_altix
88    
89    
90    ##########################################################################
91    # 2880x2176 960-cpu (96x30)x(68x32) 1/4-deg integration on altix with efc
92    # requires input files in sudirectory iter69 to be at same level as MITgcm
93    # and MITgcm_contrib.  A copy of iter69 with 1/8-deg files resides on
94    # columbia18:/nobackup18/menemenl/eight.
95    # The integration length is 3 days.
96    # First three days need to be integrated using deltat=100.
97    
98    module purge
99    module load modules scsl.1.5.0.0 intel-comp.8.0.070 mpt.1.11-85
100    cd MITgcm
101    mkdir bin exe
102    cd bin
103    \rm *
104    \cp ../../MITgcm_contrib/quarter_degree_global/code/* .
105    \cp SIZE.h_8_960 SIZE.h
106    ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas
107    make depend
108    make -j 4
109    
110    cd ../exe
111    \cp ../bin/mitgcmuv .
112    \cp ../../MITgcm_contrib/quarter_degree_global/input/* .
113    \ln -sf ../../iter69/* .
114    \cp data.exf_clim_8 data.exf_clim
115    \cp data_SIO_8 data
116    modpickup_8
117    mpirun -v -a a2k c18 480 runon 4-483 mitgcmuv : c20 480 runon 4-483 mitgcmuv
118    mpirun -v -a a2k c18 508 runon 4-511 mitgcmuv : c20 508 runon 4-511 mitgcmuv
119    
120    on columbia18:
121    ln -sf /nobackup18/menemenl/eighth /tmp/eighth
122    
123    on columbia20:
124    ln -sf /nobackup20/menemenl/eighth /tmp/eighth
125    
126    cd ~/exe
127    \cp /tmp/eighth/MITgcm/exe/mitgcmuv960 .
128    \cp /tmp/eighth/MITgcm_contrib/quarter_degree_global/input/* .
129    \ln -sf /tmp/eighth/iter69/* .
130    \cp data.exf_clim_8 data.exf_clim
131    \cp data_SIO_8 data
132    \ln -sf /tmp/eighth/MITgcm/exe/pick* .
133    
134    mpirun -v -a a2k -d /tmp/eighth/MITgcm/exe c18 480 runon 4-511 mitgcmuv960 : c20 480 runon 4-511 mitgcmuv960
135    
136    
137    
138    
139    fails for 1/8
140    >   viscA4GridMin=3.e-4,
141    >   viscA4GridMax=4.e-3,
142    >   viscC4Leith=0.05,
143    >   deltat=300
144    
145    try
146    <   viscA4GridMin=6.e-4,
147    <   viscA4GridMax=8.e-3,
148    <   viscC4Leith=0.1,
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