| 32 |
|
|
| 33 |
CONTENTS |
CONTENTS |
| 34 |
|
|
| 35 |
|
EnKF: empty |
| 36 |
|
|
| 37 |
|
build: handy place to compile MITgcm |
| 38 |
|
|
| 39 |
code: modifications to MITgcm to run in cyclindrical coordinates. At |
code: modifications to MITgcm to run in cyclindrical coordinates. At |
| 40 |
the time of this writing, it requires checkpoint48 to compile and run. |
the time of this writing, it requires checkpoint48 to compile and run. |
| 41 |
|
|
| 42 |
input: initialization and input files for MITgcm |
codemod: modification to MITgcm to run with checkpoint 54. Not quite |
| 43 |
|
ready for prime time. |
| 44 |
|
|
| 45 |
filter: source and data files to run the data assimilation and Kalman |
da: location for ensemble members and initialization and input files |
|
filter. |
|
| 46 |
|
|
| 47 |
utils: assorted Matlab m-files |
input: initialization and input files for running MITgcm |
| 48 |
|
|
| 49 |
EnKF: empty |
filter: source and data files to run the data assimilation and Kalman |
| 50 |
|
filter. |
| 51 |
|
|
| 52 |
run: empty |
run: empty |
| 53 |
|
|
| 54 |
|
utils: assorted Matlab m-files |
| 55 |
|
|
| 56 |
|
|
| 57 |
COMPILING AND RUNNING THE MODEL |
COMPILING AND TESTING THE MODEL |
| 58 |
|
|
| 59 |
The following series of commands creates the MITgcm executable. |
The following series of commands creates the MITgcm executable. |
| 60 |
|
|
| 67 |
|
|
| 68 |
Try a test run, while redirecting the standard output to a file. The |
Try a test run, while redirecting the standard output to a file. The |
| 69 |
input directory contains files that should be present in the working |
input directory contains files that should be present in the working |
| 70 |
directory when you run mitgcmuv. It is recommended that you copy the |
directory when you run mitgcmuv. Assuming that you compiled the |
| 71 |
input contents to a different directory for running -- mitgcmuv does |
MITgcm executable in the build/ directory, you would run |
| 72 |
not change them, but they can be lost in the multitudes of output |
``../build/mitgcmuv >& output.txt'' It is recommended that you copy the |
| 73 |
files. |
contents of the directory input/ to a different directory for running |
| 74 |
|
-- mitgcmuv does not change them, but they can be lost in the multitudes |
| 75 |
|
of output files. |
| 76 |
|
|
| 77 |
The data assimilation code is made by typing ``make'' in the filter |
The data assimilation code is made by typing ``make'' in the filter |
| 78 |
directory, which creates an executable named osse. |
directory, which creates an executable named ``osse''. |
| 79 |
|
|
| 80 |
Before running osse, the initial ensemble needs to be set up by |
Before running osse, the initial ensemble needs to be set up by |
| 81 |
running the mkens script in verification/osse/da. mkens creates the |
running the mkens script in verification/osse/da. mkens creates the |