| 1 | Instructions for computing Green functions with constant surface | 
| 2 | forcing for Nir Krakauer's paper on Columbia. | 
| 3 | Assume that surface forcing files are available in MITgcm/../iter69 | 
| 4 | =================================================================== | 
| 5 |  | 
| 6 | 1 ===> get MITgcm code from cvs repository | 
| 7 |  | 
| 8 | cvs co -r checkpoint51n_branch MITgcm_code | 
| 9 | cvs co -r checkpoint51n_branch MITgcm/verification/testreport | 
| 10 | cvs co -r checkpoint51n_branch MITgcm/verification/global_with_exf | 
| 11 |  | 
| 12 | 2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory | 
| 13 |  | 
| 14 | cd MITgcm | 
| 15 | cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project | 
| 16 |  | 
| 17 | 3 ===> compile and link | 
| 18 |  | 
| 19 | mkdir bin exe93 exe99 | 
| 20 | cd bin | 
| 21 | \rm * | 
| 22 | \cp ../ocean_inversion_project/code_ecco1x1/* . | 
| 23 | \mv ptracers_forcing_surf.F_gasflux ptracers_forcing_surf.F | 
| 24 | \mv ptracers_init.F_gasflux ptracers_init.F | 
| 25 | \mv PTRACERS.h_gasflux PTRACERS.h | 
| 26 | \cp SIZE.h.36 SIZE.h | 
| 27 | \rm PTRACERS_OPTIONS.h* ptracers_read_takahashi.F | 
| 28 | ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas | 
| 29 | make depend | 
| 30 | make -j | 
| 31 |  | 
| 32 | 4 ===> run integrations starting in 1993 (exe93) and 1999 (exe99) | 
| 33 |  | 
| 34 | cd ../exe93 | 
| 35 | \cp ../bin/mitgcmuv . | 
| 36 | \cp ../ocean_inversion_project/input_ecco1x1/* . | 
| 37 | \ln -sf ../../iter69/* . | 
| 38 | \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin . | 
| 39 | qsub job_gasflux93 | 
| 40 |  | 
| 41 | cd ../exe99 | 
| 42 | \cp ../bin/mitgcmuv . | 
| 43 | \cp ../ocean_inversion_project/input_ecco1x1/* . | 
| 44 | \ln -sf ../../iter69/* . | 
| 45 | \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin . | 
| 46 | qsub job_gasflux99 |