| 1 | dimitri | 1.1 | Instructions for computing Green functions with constant surface | 
| 2 |  |  | forcing for Nir Krakauer's paper on Columbia. | 
| 3 |  |  | Assume that surface forcing files are available in MITgcm/../iter69 | 
| 4 |  |  | =================================================================== | 
| 5 |  |  |  | 
| 6 |  |  | 1 ===> get MITgcm code from cvs repository | 
| 7 |  |  |  | 
| 8 |  |  | cvs co -r checkpoint51n_branch MITgcm_code | 
| 9 |  |  | cvs co -r checkpoint51n_branch MITgcm/verification/testreport | 
| 10 |  |  | cvs co -r checkpoint51n_branch MITgcm/verification/global_with_exf | 
| 11 |  |  |  | 
| 12 |  |  | 2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory | 
| 13 |  |  |  | 
| 14 |  |  | cd MITgcm | 
| 15 |  |  | cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project | 
| 16 |  |  |  | 
| 17 |  |  | 3 ===> compile and link | 
| 18 |  |  |  | 
| 19 | dimitri | 1.2 | mkdir bin exe93 exe99 | 
| 20 | dimitri | 1.1 | cd bin | 
| 21 | dimitri | 1.2 | \rm * | 
| 22 | dimitri | 1.1 | \cp ../ocean_inversion_project/code_ecco1x1/* . | 
| 23 |  |  | \mv ptracers_forcing_surf.F_gasflux ptracers_forcing_surf.F | 
| 24 |  |  | \mv ptracers_init.F_gasflux ptracers_init.F | 
| 25 |  |  | \mv PTRACERS.h_gasflux PTRACERS.h | 
| 26 |  |  | \cp SIZE.h.36 SIZE.h | 
| 27 |  |  | \rm PTRACERS_OPTIONS.h* ptracers_read_takahashi.F | 
| 28 | dimitri | 1.3 | ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas | 
| 29 | dimitri | 1.1 | make depend | 
| 30 |  |  | make -j | 
| 31 |  |  |  | 
| 32 | dimitri | 1.2 | 4 ===> run integrations starting in 1993 (exe93) and 1999 (exe99) | 
| 33 |  |  |  | 
| 34 | dimitri | 1.4 | cd ../exe93 | 
| 35 |  |  | \cp ../bin/mitgcmuv . | 
| 36 | dimitri | 1.1 | \cp ../ocean_inversion_project/input_ecco1x1/* . | 
| 37 |  |  | \ln -sf ../../iter69/* . | 
| 38 |  |  | \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin . | 
| 39 | dimitri | 1.4 | qsub job_gasflux93 | 
| 40 |  |  |  | 
| 41 |  |  | cd ../exe99 | 
| 42 |  |  | \cp ../bin/mitgcmuv . | 
| 43 |  |  | \cp ../ocean_inversion_project/input_ecco1x1/* . | 
| 44 |  |  | \ln -sf ../../iter69/* . | 
| 45 |  |  | \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin . | 
| 46 |  |  | qsub job_gasflux99 |