| 1 |
dimitri |
1.1 |
Equilibrium integrations for dissolved inorganic |
| 2 |
|
|
carbon (DIC) and for radiocarbon (C14). |
| 3 |
|
|
================================================ |
| 4 |
|
|
|
| 5 |
|
|
Instructions for using pkg/ptracers for equilibrium DIC |
| 6 |
|
|
and C14 integrations as per OCMIP 2: |
| 7 |
|
|
http://www.cgd.ucar.edu/oce/OCMIP/HOWTO-Abiotic.pdf |
| 8 |
|
|
|
| 9 |
|
|
=============================================== |
| 10 |
|
|
First check that pkg/ptracers works OK by using |
| 11 |
|
|
salinity initial and boundary conditions |
| 12 |
|
|
=============================================== |
| 13 |
|
|
|
| 14 |
|
|
1 ===> get MITgcm code from cvs repository |
| 15 |
|
|
|
| 16 |
|
|
cvs co -r checkpoint57w_post MITgcm_code |
| 17 |
|
|
cvs co -r checkpoint57w_post MITgcm/verification/testreport |
| 18 |
|
|
cvs co -r checkpoint57w_post MITgcm/verification/global_with_exf |
| 19 |
|
|
|
| 20 |
|
|
2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory |
| 21 |
|
|
|
| 22 |
|
|
cd MITgcm |
| 23 |
|
|
cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project |
| 24 |
|
|
|
| 25 |
|
|
3 ===> compile and link |
| 26 |
|
|
|
| 27 |
|
|
mkdir bin exe |
| 28 |
|
|
cd bin |
| 29 |
|
|
\cp ../verification/global_with_exf/code/* . |
| 30 |
|
|
\cp ../ocean_inversion_project/code_c14/* . |
| 31 |
|
|
../tools/genmake2 |
| 32 |
|
|
make depend |
| 33 |
|
|
make -j |
| 34 |
|
|
\cp mitgcmuv ../exe |
| 35 |
|
|
|
| 36 |
|
|
4 ===> execute |
| 37 |
|
|
|
| 38 |
|
|
cd ../exe |
| 39 |
|
|
\cp ../verification/global_with_exf/input/eedata . |
| 40 |
|
|
\cp ../verification/global_with_exf/input/data.* . |
| 41 |
|
|
\cp ../verification/global_with_exf/input/POLY3.COEFFS . |
| 42 |
|
|
\ln -sf ../verification/global_with_exf/input/*.bin . |
| 43 |
|
|
\cp ../ocean_inversion_project/input/* . |
| 44 |
|
|
\cp ../ocean_inversion_project/input_c14/* . |
| 45 |
|
|
./mitgcmuv >! output.txt |
| 46 |
|
|
|
| 47 |
|
|
5 ===> check that PTRACER output and salinity output are identical. |
| 48 |
|
|
|
| 49 |
|
|
diff PTRACER01.0000000020.data S.0000000020.data |
| 50 |
|
|
diff PTRACER02.0000000020.data S.0000000020.data |
| 51 |
|
|
|
| 52 |
|
|
|
| 53 |
|
|
========================================================== |
| 54 |
|
|
Instructions for carrying out 3000-year quasi-stationary |
| 55 |
|
|
integration using the ecco1x1 configuration on columbia. |
| 56 |
|
|
This assumes that the appropriate libnetcdf.a exists |
| 57 |
|
|
and that it be specified in the genmake2 option file. |
| 58 |
|
|
It also assumes that surface forcing files are available |
| 59 |
|
|
in MITgcm/../iter69 |
| 60 |
|
|
========================================================== |
| 61 |
|
|
|
| 62 |
|
|
cd MITgcm/exe |
| 63 |
|
|
\rm * |
| 64 |
|
|
cd ../bin |
| 65 |
|
|
\rm * |
| 66 |
|
|
\cp ../ocean_inversion_project/code_ecco1x1/* . |
| 67 |
|
|
\cp SIZE.h.ecco1x1 SIZE.h |
| 68 |
|
|
\cp ptracers_forcing_surf.F.ecco1x1 ptracers_forcing_surf.F |
| 69 |
|
|
../tools/genmake2 -of linux_ia64_efc+mpi_altix |
| 70 |
|
|
make depend |
| 71 |
|
|
make -j |
| 72 |
|
|
cd ../exe |
| 73 |
|
|
\cp ../ocean_inversion_project/input_ecco1x1/* . |
| 74 |
|
|
\ln -sf ../../iter69/* . |
| 75 |
|
|
\ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin . |
| 76 |
|
|
\ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin . |
| 77 |
|
|
qsub job01s |
Parent Directory
| 
Revision Log
| 
Revision Graph