/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.25 by dimitri, Mon Nov 1 20:03:35 2004 UTC revision 1.28 by dimitri, Mon Nov 22 23:47:01 2004 UTC
# Line 13  having to link netcdf library with MITgc Line 13  having to link netcdf library with MITgc
13  respective README files in each directory for details.  respective README files in each directory for details.
14    
15    
16    Notes and problems:
17    ===================
18    
19    there is problem generating ECCO_MaskAreaBathy.nc on columbia
20    works OK on nireas
21    
22    variable global_mean_conc in 0D output from mk_output.F is
23    screwed up
24    
25    
26    
27  ===============================================  ===============================================
28  First check that pkg/ptracers works OK by using  First check that pkg/ptracers works OK by using
29  salinity initial and boundary conditions  salinity initial and boundary conditions
# Line 168  the ecco1x1 configuration and netcdf out Line 179  the ecco1x1 configuration and netcdf out
179  This assumes that the appropriate libnetcdf.a exists  This assumes that the appropriate libnetcdf.a exists
180  and that it be specified in the genmake2 option file.  and that it be specified in the genmake2 option file.
181  It also assumes that surface forcing files are available  It also assumes that surface forcing files are available
182  in /nobackup2/menemenl/ocmip/iter69  in MITgcm/../iter69
183  ==========================================================  ==========================================================
184    
185   cd MITgcm/exe   cd MITgcm/exe
# Line 192  in /nobackup2/menemenl/ocmip/iter69 Line 203  in /nobackup2/menemenl/ocmip/iter69
203    
204    
205  ==========================================================  ==========================================================
206    Instructions for carrying out 3000-year quasi-stationary
207    integration using the ecco1x1 configuration and netcdf
208    output on columbia.
209    This assumes that the appropriate libnetcdf.a exists
210    and that it be specified in the genmake2 option file.
211    It also assumes that surface forcing files are available
212    in MITgcm/../iter69
213    ==========================================================
214    
215     cd MITgcm/exe
216     \rm *
217     cd ../bin
218     \rm *
219     \cp ../ocean_inversion_project/code_ecco1x1/* .
220     \cp ../ocean_inversion_project/write_netCDF/*  .
221     \rm mk_output.F
222     \cp SIZE.h.96 SIZE.h
223     \cp PTRACERS_OPTIONS.h.stationary PTRACERS_OPTIONS.h
224     ../tools/genmake2 -of linux_ia64_efc+mpi_altix
225     make depend
226     make -j 16
227     cd ../exe
228     \cp ../ocean_inversion_project/input_ecco1x1/* .
229     \ln -sf ../../iter69/* .
230     \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
231     \ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
232     qsub job01s
233    
234    
235    ==========================================================
236  Instructions for generating netcdf output files on columbia  Instructions for generating netcdf output files on columbia
237  ==========================================================  ==========================================================
238    
# Line 205  efc -W0 -WB mk_output.F write_nc_phys.F Line 246  efc -W0 -WB mk_output.F write_nc_phys.F
246       write_nc_diag_0D.F write_nc_diag_2D.F \       write_nc_diag_0D.F write_nc_diag_2D.F \
247       -I/u/menemenl/software/netcdf-3.5.0/include \       -I/u/menemenl/software/netcdf-3.5.0/include \
248       -L/u/menemenl/software/netcdf-3.5.0/lib -lnetcdf       -L/u/menemenl/software/netcdf-3.5.0/lib -lnetcdf
249  a.out  ./a.out
250    
251    
252  ==========================================================  ==========================================================
# Line 222  efc -W0 -WB mk_output.F write_nc_phys.F Line 263  efc -W0 -WB mk_output.F write_nc_phys.F
263       write_nc_diag_0D.F write_nc_diag_2D.F \       write_nc_diag_0D.F write_nc_diag_2D.F \
264       -I/u2/dmenem/software/netcdf-3.5.0/include \       -I/u2/dmenem/software/netcdf-3.5.0/include \
265       -L/u2/dmenem/software/netcdf-3.5.0/lib -lnetcdf       -L/u2/dmenem/software/netcdf-3.5.0/lib -lnetcdf
266  a.out  ./a.out
267    
268    
269  ======================================================  ======================================================
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