/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.21 by dimitri, Thu Sep 30 23:45:07 2004 UTC revision 1.22 by dimitri, Wed Oct 6 20:26:54 2004 UTC
# Line 20  salinity initial and boundary conditions Line 20  salinity initial and boundary conditions
20    
21  1 ===> get MITgcm code from cvs repository  1 ===> get MITgcm code from cvs repository
22    
  CVSROOT=:pserver:cvsanon@mitgcm.org:/u/gcmpack  
  cvs login ( CVS password: cvsanon )  
23   cvs co -r checkpoint51n_branch MITgcm_code   cvs co -r checkpoint51n_branch MITgcm_code
24   cvs co -r checkpoint51n_branch MITgcm/verification/testreport   cvs co -r checkpoint51n_branch MITgcm/verification/testreport
25   cvs co -r checkpoint51n_branch MITgcm/verification/global_with_exf   cvs co -r checkpoint51n_branch MITgcm/verification/global_with_exf
# Line 35  salinity initial and boundary conditions Line 33  salinity initial and boundary conditions
33    
34   mkdir bin exe   mkdir bin exe
35   cd bin   cd bin
36   cp ../verification/global_with_exf/code/* .   \cp ../verification/global_with_exf/code/* .
37   cp ../ocean_inversion_project/code/* .   \cp ../ocean_inversion_project/code/* .
38   rm ptracers_*.F PTRACERS_OPTIONS.h   \rm ptracers_*.F PTRACERS_OPTIONS.h
39   ../tools/genmake2   ../tools/genmake2
40     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion:    ../tools/genmake2 -of linux_ia64_efc+mpi       )
41       (on columbia: ../tools/genmake2 -of linux_ia64_efc+mpi_altix )
42   make depend   make depend
43   make   make -j 16
44    
45  4 ===> execute  4 ===> execute
46    
47   cd ../exe   cd ../exe
48   cp ../verification/global_with_exf/input/eedata .   \cp ../verification/global_with_exf/input/eedata .
49   cp ../verification/global_with_exf/input/data.* .   \cp ../verification/global_with_exf/input/data.* .
50   cp ../verification/global_with_exf/input/POLY3.COEFFS .   \cp ../verification/global_with_exf/input/POLY3.COEFFS .
51   ln -sf ../verification/global_with_exf/input/*.bin .   \ln -sf ../verification/global_with_exf/input/*.bin .
52   cp ../ocean_inversion_project/input/* .   \cp ../ocean_inversion_project/input/* .
53   cp data.test data   \cp data.test data
54   cp data.ptracers.test data.ptracers   \cp data.ptracers.test data.ptracers
55   mitgcmuv > output.txt   ./mitgcmuv >! output.txt
56      
57  5 ===> check that PTRACER output and salinity output are identical.  5 ===> check that PTRACER output and salinity output are identical.
58    
59   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
# Line 93  integration using the global_ocean.90x40 Line 92  integration using the global_ocean.90x40
92   mpirun -np 24 dplace -s1 mitgcmuv < /dev/null > & ! errlog &   mpirun -np 24 dplace -s1 mitgcmuv < /dev/null > & ! errlog &
93     (on orion: qsub job.orion)     (on orion: qsub job.orion)
94    
95    
96  ==========================================================  ==========================================================
97  MPI instructions for carrying out time-dependent, 1765-2005,  MPI instructions for carrying out time-dependent, 1765-2005,
98  anthropogenic carbon perturbation tracer experiments using  anthropogenic carbon perturbation tracer experiments using
# Line 161  and that it be specified in the genmake2 Line 161  and that it be specified in the genmake2
161   mitgcmuv > output .txt &   mitgcmuv > output .txt &
162    
163    
164  ======================================================  ==========================================================
165    Instructions for carrying out time-dependent, 1765-2005,
166    anthropogenic carbon perturbation tracer experiments using
167    the ecco1x1 configuration and netcdf output on columbia.
168    This assumes that the appropriate libnetcdf.a exists
169    and that it be specified in the genmake2 option file.
170    It also assumes that surface forcing files are available
171    in /nobackup2/menemenl/ocmip/iter69
172    ==========================================================
173    
174     cd MITgcm/exe
175     \rm *
176     cd ../bin
177     \rm *
178     \cp ../ocean_inversion_project/code_ecco1x1/* .
179     \cp ../ocean_inversion_project/write_netCDF/*  .
180     \rm mk_output.F
181     \cp SIZE.h.144 SIZE.h
182     ../tools/genmake2 -of linux_ia64_efc+mpi_altix
183     make depend
184     make -j 16
185     cd ../exe
186     \cp ../ocean_inversion_project/input_ecco1x1/* .
187     ln -sf /nobackup2/menemenl/ocmip/iter69/* .
188     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
189     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
190     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
191     qsub job01
192    
193    
194  ==========================================================  ==========================================================
195  Instructions for generating netcdf output files on orion  Instructions for generating netcdf output files on orion
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