/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.10 by dimitri, Fri Oct 10 16:33:09 2003 UTC revision 1.17 by dimitri, Tue Oct 28 01:31:02 2003 UTC
# Line 22  salinity initial and boundary conditions Line 22  salinity initial and boundary conditions
22    
23   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
24   cvs login ( CVS password: cvsanon )   cvs login ( CVS password: cvsanon )
25   cvs co -P MITgcm   cvs co -r checkpoint51n_branch MITgcm
26    
27  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
28    
# Line 33  salinity initial and boundary conditions Line 33  salinity initial and boundary conditions
33    
34   cd bin   cd bin
35   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
36   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
37   rm ptracers_*.F   rm ptracers_*.F PTRACERS_OPTIONS.h
38   ../tools/genmake   ../tools/genmake2
39       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
40   make depend   make depend
41   make   make
42    
# Line 56  salinity initial and boundary conditions Line 56  salinity initial and boundary conditions
56    
57   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
58   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
59     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
60     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
61    
62    
63  ==========================================================  ==========================================================
64  Instructions for carrying out a 3000-year quasi-stationary  MPI instructions for carrying out a 3000-year quasi-stationary
65  integration using the global_ocean.90x40x15 configuration.  integration using the global_ocean.90x40x15 configuration.
66  ==========================================================  ==========================================================
67    
68  1 ===> compile, link, and execute   cd MITgcm/exe
69     rm *
70     cd ../bin
71     rm *
72     cp ../verification/global_with_exf/code/* .
73     cp ../ocean_inversion_project/code/* .
74     rm PTRACERS_OPTIONS.h
75     cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
76     cp SIZE.h_mpi SIZE.h
77     ../tools/genmake2
78       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
79     make depend
80     make
81     cd ../exe
82     cp ../verification/global_with_exf/input/eedata .
83     cp ../verification/global_with_exf/input/data.* .
84     cp ../verification/global_with_exf/input/POLY3.COEFFS .
85     ln -sf ../verification/global_with_exf/input/*.bin .
86     cp ../ocean_inversion_project/input/* .
87     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
88     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
89     cp data.stationary.1 data
90     mpirun -np 24 dplace -s1 mitgcmuv < /dev/null > & ! errlog &
91    
92    
93    ==========================================================
94    Instructions for carrying out time-dependent, 1765-2005,
95    anthropogenic carbon perturbation tracer experiments using
96    the global_ocean.90x40x15 configuration.
97    ==========================================================
98    
99   cd MITgcm/exe   cd MITgcm/exe
100   rm *   rm *
101   cd ../bin   cd ../bin
102   rm *   rm *
103   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
104   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
105   ../tools/genmake   ../tools/genmake2
106       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
107   make depend   make depend
108   make   make
109   cd ../exe   cd ../exe
# Line 81  integration using the global_ocean.90x40 Line 112  integration using the global_ocean.90x40
112   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
113   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
114   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
115     cp data.1765-2005 data
116   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
117   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
118     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
119   mitgcmuv > output .txt &   mitgcmuv > output .txt &
120    
121    
122  ==========================================================  ==========================================================
123  MPI instructions for carrying out a 3000-year quasi-stationary  Instructions for carrying out time-dependent, 1765-2005,
124  integration using the global_ocean.90x40x15 configuration.  anthropogenic carbon perturbation tracer experiments using
125    global_ocean.90x40x15 configuration and netcdf output.
126    This assumes that the appropriate libnetcdf.a exists
127    and that it be specified in the genmake2 option file.
128  ==========================================================  ==========================================================
129    
 1 ===> compile, link, and execute  
   
130   cd MITgcm/exe   cd MITgcm/exe
131   rm *   rm *
132   cd ../bin   cd ../bin
133   rm *   rm *
134   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
135   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
136   cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h   cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
137   cp SIZE.h_mpi SIZE.h   cp ../ocean_inversion_project/write_netCDF/*  .
138   ../tools/genmake  
139    ### need customized option file; example below is for nireas
140     ../tools/genmake2 -of linux_ia32_g77_netcdf
141    
142   make depend   make depend
143   make   make
144   cd ../exe   cd ../exe
# Line 111  integration using the global_ocean.90x40 Line 147  integration using the global_ocean.90x40
147   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
148   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
149   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
150     cp data.1765-2005 data
151   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
152   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
153   mpirun -np 36 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
154     mitgcmuv > output .txt &
155    
156    
157  ======================================================  ======================================================
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