/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.9 by dimitri, Fri Oct 10 16:30:39 2003 UTC revision 1.14 by dimitri, Tue Oct 28 00:27:48 2003 UTC
# Line 22  salinity initial and boundary conditions Line 22  salinity initial and boundary conditions
22    
23   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
24   cvs login ( CVS password: cvsanon )   cvs login ( CVS password: cvsanon )
25   cvs co MITgcm   cvs co -P MITgcm
26    
27  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
28    
# Line 33  salinity initial and boundary conditions Line 33  salinity initial and boundary conditions
33    
34   cd bin   cd bin
35   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
36   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
37   rm ptracers_*.F   rm ptracers_*.F PTRACERS_OPTIONS.h
38   ../tools/genmake   ../tools/genmake2
39       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
40   make depend   make depend
41   make   make
42    
# Line 56  salinity initial and boundary conditions Line 56  salinity initial and boundary conditions
56    
57   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
58   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
59     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
60     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
61    
62    
63  ==========================================================  ==========================================================
64  Instructions for carrying out a 3000-year quasi-stationary  MPI instructions for carrying out a 3000-year quasi-stationary
65  integration using the global_ocean.90x40x15 configuration.  integration using the global_ocean.90x40x15 configuration.
66  ==========================================================  ==========================================================
67    
68  1 ===> compile, link, and execute   cd MITgcm/exe
69     rm *
70     cd ../bin
71     rm *
72     cp ../verification/global_with_exf/code/* .
73     cp ../ocean_inversion_project/code/* .
74     rm PTRACERS_OPTIONS.h
75     cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
76     cp SIZE.h_mpi SIZE.h
77     ../tools/genmake2
78       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
79     make depend
80     make
81     cd ../exe
82     cp ../verification/global_with_exf/input/eedata .
83     cp ../verification/global_with_exf/input/data.* .
84     cp ../verification/global_with_exf/input/POLY3.COEFFS .
85     ln -sf ../verification/global_with_exf/input/*.bin .
86     cp ../ocean_inversion_project/input/* .
87     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
88     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
89     mpirun -np 24 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &
90    
91    
92    ==========================================================
93    Instructions for carrying out time-dependent, 1765-2005,
94    anthropogenic carbon perturbation tracer experiments using
95    the global_ocean.90x40x15 configuration.
96    ==========================================================
97    
98   cd MITgcm/exe   cd MITgcm/exe
99   rm *   rm *
100   cd ../bin   cd ../bin
101   rm *   rm *
102   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
103   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
104   ../tools/genmake   ../tools/genmake2
105       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
106   make depend   make depend
107   make   make
108   cd ../exe   cd ../exe
# Line 81  integration using the global_ocean.90x40 Line 111  integration using the global_ocean.90x40
111   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
112   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
113   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
114     cp data.1765-2005 data
115   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
116   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
117     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
118   mitgcmuv > output .txt &   mitgcmuv > output .txt &
119    
120    
121  ==========================================================  ==========================================================
122  MPI instructions for carrying out a 3000-year quasi-stationary  Instructions for carrying out time-dependent, 1765-2005,
123  integration using the global_ocean.90x40x15 configuration.  anthropogenic carbon perturbation tracer experiments using
124    global_ocean.90x40x15 configuration and netcdf output.
125    This assumes that the appropriate libnetcdf.a exists
126    and that it be specified in the genmake2 option file.
127  ==========================================================  ==========================================================
128    
 1 ===> compile, link, and execute  
   
129   cd MITgcm/exe   cd MITgcm/exe
130   rm *   rm *
131   cd ../bin   cd ../bin
132   rm *   rm *
133   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
134   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
135   cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h   cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
136   cp SIZE.h_mpi SIZE.h   cp ../ocean_inversion_project/write_netCDF/*  .
137   ../tools/genmake  
138    ### need customized option file; example below is for nireas
139     ../tools/genmake2 -of linux_ia32_g77_netcdf
140    
141   make depend   make depend
142   make   make
143   cd ../exe   cd ../exe
# Line 111  integration using the global_ocean.90x40 Line 146  integration using the global_ocean.90x40
146   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
147   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
148   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
149     cp data.1765-2005 data
150   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
151   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
152   mpirun -np 36 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
153     mitgcmuv > output .txt &
154    
155    
156  ======================================================  ======================================================
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