/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.7 by dimitri, Fri Sep 26 20:01:41 2003 UTC revision 1.13 by dimitri, Tue Oct 21 06:21:51 2003 UTC
# Line 22  salinity initial and boundary conditions Line 22  salinity initial and boundary conditions
22    
23   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
24   cvs login ( CVS password: cvsanon )   cvs login ( CVS password: cvsanon )
25   cvs co MITgcm   cvs co -P MITgcm
26    
27  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
28    
# Line 33  salinity initial and boundary conditions Line 33  salinity initial and boundary conditions
33    
34   cd bin   cd bin
35   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
36   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
37   rm ptracers_*.F   rm ptracers_*.F PTRACERS_OPTIONS.h
38   ../tools/genmake   ../tools/genmake2
39       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
40   make depend   make depend
41   make   make
42    
# Line 63  Instructions for carrying out a 3000-yea Line 63  Instructions for carrying out a 3000-yea
63  integration using the global_ocean.90x40x15 configuration.  integration using the global_ocean.90x40x15 configuration.
64  ==========================================================  ==========================================================
65    
66  1 ===> compile, link, and execute   cd MITgcm/exe
67     rm *
68     cd ../bin
69     rm *
70     cp ../verification/global_with_exf/code/* .
71     cp ../ocean_inversion_project/code/* .
72     rm PTRACERS_OPTIONS.h
73     ../tools/genmake2
74       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
75     make depend
76     make
77     cd ../exe
78     cp ../verification/global_with_exf/input/eedata .
79     cp ../verification/global_with_exf/input/data.* .
80     cp ../verification/global_with_exf/input/POLY3.COEFFS .
81     ln -sf ../verification/global_with_exf/input/*.bin .
82     cp ../ocean_inversion_project/input/* .
83     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
84     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
85     mitgcmuv > output .txt &
86    
87    
88    ==========================================================
89    MPI instructions for carrying out a 3000-year quasi-stationary
90    integration using the global_ocean.90x40x15 configuration.
91    ==========================================================
92    
93   cd MITgcm/exe   cd MITgcm/exe
94   rm *   rm *
95   cd ../bin   cd ../bin
96   rm *   rm *
97   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
98   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
99   ../tools/genmake   rm PTRACERS_OPTIONS.h
100     cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
101     cp SIZE.h_mpi SIZE.h
102     ../tools/genmake2
103       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
104     make depend
105     make
106     cd ../exe
107     cp ../verification/global_with_exf/input/eedata .
108     cp ../verification/global_with_exf/input/data.* .
109     cp ../verification/global_with_exf/input/POLY3.COEFFS .
110     ln -sf ../verification/global_with_exf/input/*.bin .
111     cp ../ocean_inversion_project/input/* .
112     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
113     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
114     mpirun -np 36 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &
115    
116    
117    ==========================================================
118    Instructions for carrying out time-dependent, 1765-2005,
119    anthropogenic carbon perturbation tracer experiments using
120    the global_ocean.90x40x15 configuration.
121    ==========================================================
122    
123     cd MITgcm/exe
124     rm *
125     cd ../bin
126     rm *
127     cp ../verification/global_with_exf/code/* .
128     cp ../ocean_inversion_project/code/* .
129     ../tools/genmake2
130       (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
131     make depend
132     make
133     cd ../exe
134     cp ../verification/global_with_exf/input/eedata .
135     cp ../verification/global_with_exf/input/data.* .
136     cp ../verification/global_with_exf/input/POLY3.COEFFS .
137     ln -sf ../verification/global_with_exf/input/*.bin .
138     cp ../ocean_inversion_project/input/* .
139     cp data.1765-2005 data
140     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
141     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
142     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
143     mitgcmuv > output .txt &
144    
145    
146    ==========================================================
147    Instructions for carrying out time-dependent, 1765-2005,
148    anthropogenic carbon perturbation tracer experiments using
149    global_ocean.90x40x15 configuration and netcdf output.
150    This assumes that the appropriate libnetcdf.a exists
151    and that it be specified in the genmake2 option file.
152    ==========================================================
153    
154     cd MITgcm/exe
155     rm *
156     cd ../bin
157     rm *
158     cp ../verification/global_with_exf/code/* .
159     cp ../ocean_inversion_project/code/* .
160     cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
161     cp ../ocean_inversion_project/write_netCDF/*  .
162    
163    ### need customized option file; example below is for nireas
164     ../tools/genmake2 -of linux_ia32_g77_netcdf
165    
166   make depend   make depend
167   make   make
168   cd ../exe   cd ../exe
# Line 81  integration using the global_ocean.90x40 Line 171  integration using the global_ocean.90x40
171   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
172   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
173   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
174     cp data.1765-2005 data
175   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
176   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
177     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
178   mitgcmuv > output .txt &   mitgcmuv > output .txt &
179    
180    
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