--- MITgcm_contrib/ocean_inversion_project/README	2003/10/21 03:25:30	1.12
+++ MITgcm_contrib/ocean_inversion_project/README	2003/10/21 06:21:51	1.13
@@ -68,7 +68,6 @@
  cd ../bin
  rm *
  cp ../verification/global_with_exf/code/* .
- cp ../ocean_inversion_project/code/.genmakerc .
  cp ../ocean_inversion_project/code/* .
  rm PTRACERS_OPTIONS.h
  ../tools/genmake2
@@ -96,7 +95,6 @@
  cd ../bin
  rm *
  cp ../verification/global_with_exf/code/* .
- cp ../ocean_inversion_project/code/.genmakerc .
  cp ../ocean_inversion_project/code/* .
  rm PTRACERS_OPTIONS.h
  cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
@@ -127,13 +125,47 @@
  cd ../bin
  rm *
  cp ../verification/global_with_exf/code/* .
- cp ../ocean_inversion_project/code/.genmakerc .
  cp ../ocean_inversion_project/code/* .
  ../tools/genmake2
    (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
  make depend
  make
  cd ../exe
+ cp ../verification/global_with_exf/input/eedata .
+ cp ../verification/global_with_exf/input/data.* .
+ cp ../verification/global_with_exf/input/POLY3.COEFFS .
+ ln -sf ../verification/global_with_exf/input/*.bin .
+ cp ../ocean_inversion_project/input/* .
+ cp data.1765-2005 data
+ ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
+ ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
+ ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
+ mitgcmuv > output .txt &
+
+
+==========================================================
+Instructions for carrying out time-dependent, 1765-2005,
+anthropogenic carbon perturbation tracer experiments using
+global_ocean.90x40x15 configuration and netcdf output.
+This assumes that the appropriate libnetcdf.a exists
+and that it be specified in the genmake2 option file.
+==========================================================
+
+ cd MITgcm/exe
+ rm *
+ cd ../bin
+ rm *
+ cp ../verification/global_with_exf/code/* .
+ cp ../ocean_inversion_project/code/* .
+ cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
+ cp ../ocean_inversion_project/write_netCDF/*  .
+
+### need customized option file; example below is for nireas
+ ../tools/genmake2 -of linux_ia32_g77_netcdf
+
+ make depend
+ make
+ cd ../exe
  cp ../verification/global_with_exf/input/eedata .
  cp ../verification/global_with_exf/input/data.* .
  cp ../verification/global_with_exf/input/POLY3.COEFFS .