--- MITgcm_contrib/ocean_inversion_project/README	2003/09/17 21:45:51	1.1
+++ MITgcm_contrib/ocean_inversion_project/README	2003/09/18 02:33:38	1.2
@@ -5,12 +5,59 @@
 Green's functions for Gruber's ocean inversion project
 (http://quercus.igpp.ucla.edu/OceanInversion/).
 
-=====================================
 
-To run a pkg/ptracers test case using salt initial and boundary conditions:
+===============================================
+First check that pkg/ptracers works OK by using
+salinity initial and boundary conditions
+===============================================
+
+1 ===> get MITgcm code from cvs repository
+
+ CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
+ cvs login ( CVS password: cvsanon )
+ cvs co MITgcm
+
+2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
+
+ cd MITgcm
+ cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project
+
+3 ===> compile
+
+ cd bin
+ cp ../verification/global_with_exf/code/* .
+ cp ../ocean_inversion_project/code/.genmakerc .
+ cp ../ocean_inversion_project/code/* .
+ cp ../ocean_inversion_project/code/ptracers_forcing.F.test ptracers_forcing.F
+ cp ../ocean_inversion_project/code/ptracers_init.F.test ptracers_init.F
+ cp ../ocean_inversion_project/code/ptracers_read_mask.F.test ptracers_read_mask.F
+ ../tools/genmake
+ make depend
+ make
+
+4 ===> execute
+
+ cd ../exe
+ cp ../verification/global_with_exf/input/* .
+ cp ../ocean_inversion_project/input/* .
+ cp ../ocean_inversion_project/input/data.ptracers.test data.ptracers
+ mitgcmuv > output .txt
+  
+5 ===> check that PTRACER output for tracer 1 and tracer 30
+  ===> is identical to salinity output
+
+ diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
+ diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
+
+
+======================================================
+Second generate binary input files.  netcdf files are not OK
+
+======================================================
+======================================================
+======================================================
+======================================================
 
- 
- 
  cd MITgcm/bin
  cp ../verification/global_with_exf/code/* .
  cp ../code/.genmakerc .
@@ -26,11 +73,6 @@
  cp ../input/* .
  cp ../input/data.ptracers.test data.ptracers
  mitgcmuv > output .txt
- 
-===> check that PTRACER output is identical to salinity output
-
- diff PTRACER30.0000000020.001.001.data PTRACER01.0000000020.001.001.data
- diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
 
 ===> examine interpolation output for 30-region mask