/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.23 by dimitri, Fri Oct 8 06:21:29 2004 UTC revision 1.30 by dimitri, Wed Aug 24 20:59:54 2005 UTC
# Line 12  have been converted to binary format in Line 12  have been converted to binary format in
12  having to link netcdf library with MITgcm code.  See  having to link netcdf library with MITgcm code.  See
13  respective README files in each directory for details.  respective README files in each directory for details.
14    
15    Instructions for CFC-11 computations are in
16    cvs co -r release1_50yr MITgcm
17    MITgcm/verification/global_with_CFC11/README
18    
19    
20    Notes and problems:
21    ===================
22    
23    there is problem generating ECCO_MaskAreaBathy.nc on columbia
24    works OK on nireas
25    
26    variable global_mean_conc in 0D output from mk_output.F is
27    screwed up
28    
29    
30    
31  ===============================================  ===============================================
32  First check that pkg/ptracers works OK by using  First check that pkg/ptracers works OK by using
# Line 168  the ecco1x1 configuration and netcdf out Line 183  the ecco1x1 configuration and netcdf out
183  This assumes that the appropriate libnetcdf.a exists  This assumes that the appropriate libnetcdf.a exists
184  and that it be specified in the genmake2 option file.  and that it be specified in the genmake2 option file.
185  It also assumes that surface forcing files are available  It also assumes that surface forcing files are available
186  in /nobackup2/menemenl/ocmip/iter69  in MITgcm/../iter69
187  ==========================================================  ==========================================================
188    
189   cd MITgcm/exe   cd MITgcm/exe
# Line 178  in /nobackup2/menemenl/ocmip/iter69 Line 193  in /nobackup2/menemenl/ocmip/iter69
193   \cp ../ocean_inversion_project/code_ecco1x1/* .   \cp ../ocean_inversion_project/code_ecco1x1/* .
194   \cp ../ocean_inversion_project/write_netCDF/*  .   \cp ../ocean_inversion_project/write_netCDF/*  .
195   \rm mk_output.F   \rm mk_output.F
196   \cp SIZE.h.144 SIZE.h   \cp SIZE.h.96 SIZE.h
197   ../tools/genmake2 -of linux_ia64_efc+mpi_altix   ../tools/genmake2 -of linux_ia64_efc+mpi_altix
198   make depend   make depend
199   make -j 16   make -j 16
# Line 192  in /nobackup2/menemenl/ocmip/iter69 Line 207  in /nobackup2/menemenl/ocmip/iter69
207    
208    
209  ==========================================================  ==========================================================
210    Instructions for carrying out 3000-year quasi-stationary
211    integration using the ecco1x1 configuration and netcdf
212    output on columbia.
213    This assumes that the appropriate libnetcdf.a exists
214    and that it be specified in the genmake2 option file.
215    It also assumes that surface forcing files are available
216    in MITgcm/../iter69
217    ==========================================================
218    
219     cd MITgcm/exe
220     \rm *
221     cd ../bin
222     \rm *
223     \cp ../ocean_inversion_project/code_ecco1x1/* .
224     \cp ../ocean_inversion_project/write_netCDF/*  .
225     \rm mk_output.F
226     \cp SIZE.h.96 SIZE.h
227     \cp PTRACERS_OPTIONS.h.stationary PTRACERS_OPTIONS.h
228     ../tools/genmake2 -of linux_ia64_efc+mpi_altix
229     make depend
230     make -j 16
231     cd ../exe
232     \cp ../ocean_inversion_project/input_ecco1x1/* .
233     \ln -sf ../../iter69/* .
234     \ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
235     \ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
236     qsub job01s
237    
238    
239    ==========================================================
240    Instructions for generating netcdf output files on columbia
241    ==========================================================
242    
243    cd ocean_inversion_project/write_netCDF
244    setenv F_UFMTENDIAN big
245    
246    (check that defaults in  mk_output.F are appropriate)
247    
248    ifort -assume byterecl -W0 -WB mk_output.F write_nc_phys.F nc_util.F \
249         handle_errors.F write_nc_basisfnctns.F \
250         write_nc_diag_0D.F write_nc_diag_2D.F \
251         -I/u/menemenl/software/netcdf-3.5.0/include \
252         -L/u/menemenl/software/netcdf-3.5.0/lib -lnetcdf
253    ./a.out
254    
255    
256    ==========================================================
257  Instructions for generating netcdf output files on orion  Instructions for generating netcdf output files on orion
258  ==========================================================  ==========================================================
259    
# Line 205  efc -W0 -WB mk_output.F write_nc_phys.F Line 267  efc -W0 -WB mk_output.F write_nc_phys.F
267       write_nc_diag_0D.F write_nc_diag_2D.F \       write_nc_diag_0D.F write_nc_diag_2D.F \
268       -I/u2/dmenem/software/netcdf-3.5.0/include \       -I/u2/dmenem/software/netcdf-3.5.0/include \
269       -L/u2/dmenem/software/netcdf-3.5.0/lib -lnetcdf       -L/u2/dmenem/software/netcdf-3.5.0/lib -lnetcdf
270  a.out  ./a.out
271    
272    
273  ======================================================  ======================================================
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