/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.11 by dimitri, Mon Oct 20 06:12:24 2003 UTC revision 1.17 by dimitri, Tue Oct 28 01:31:02 2003 UTC
# Line 22  salinity initial and boundary conditions Line 22  salinity initial and boundary conditions
22    
23   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
24   cvs login ( CVS password: cvsanon )   cvs login ( CVS password: cvsanon )
25   cvs co -P MITgcm   cvs co -r checkpoint51n_branch MITgcm
26    
27  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
28    
# Line 34  salinity initial and boundary conditions Line 34  salinity initial and boundary conditions
34   cd bin   cd bin
35   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
36   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
37   rm ptracers_*.F   rm ptracers_*.F PTRACERS_OPTIONS.h
38   ../tools/genmake2   ../tools/genmake2
39     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
40   make depend   make depend
# Line 56  salinity initial and boundary conditions Line 56  salinity initial and boundary conditions
56    
57   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
58   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
59     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
60     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
61    
62    
63  ==========================================================  ==========================================================
64  Instructions for carrying out a 3000-year quasi-stationary  MPI instructions for carrying out a 3000-year quasi-stationary
65  integration using the global_ocean.90x40x15 configuration.  integration using the global_ocean.90x40x15 configuration.
66  ==========================================================  ==========================================================
67    
 1 ===> compile, link, and execute  
   
68   cd MITgcm/exe   cd MITgcm/exe
69   rm *   rm *
70   cd ../bin   cd ../bin
71   rm *   rm *
72   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
73   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
74     rm PTRACERS_OPTIONS.h
75     cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
76     cp SIZE.h_mpi SIZE.h
77   ../tools/genmake2   ../tools/genmake2
78     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
79   make depend   make depend
# Line 84  integration using the global_ocean.90x40 Line 86  integration using the global_ocean.90x40
86   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
87   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
88   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
89   mitgcmuv > output .txt &   cp data.stationary.1 data
90     mpirun -np 24 dplace -s1 mitgcmuv < /dev/null > & ! errlog &
91    
92    
93  ==========================================================  ==========================================================
94  MPI instructions for carrying out a 3000-year quasi-stationary  Instructions for carrying out time-dependent, 1765-2005,
95  integration using the global_ocean.90x40x15 configuration.  anthropogenic carbon perturbation tracer experiments using
96    the global_ocean.90x40x15 configuration.
97  ==========================================================  ==========================================================
98    
 1 ===> compile, link, and execute  
   
99   cd MITgcm/exe   cd MITgcm/exe
100   rm *   rm *
101   cd ../bin   cd ../bin
102   rm *   rm *
103   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
104   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
  cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
  cp SIZE.h_mpi SIZE.h  
105   ../tools/genmake2   ../tools/genmake2
106     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
107   make depend   make depend
# Line 113  integration using the global_ocean.90x40 Line 112  integration using the global_ocean.90x40
112   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
113   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
114   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
115     cp data.1765-2005 data
116   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
117   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
118   mpirun -np 36 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
119     mitgcmuv > output .txt &
120    
121    
122    ==========================================================
123    Instructions for carrying out time-dependent, 1765-2005,
124    anthropogenic carbon perturbation tracer experiments using
125    global_ocean.90x40x15 configuration and netcdf output.
126    This assumes that the appropriate libnetcdf.a exists
127    and that it be specified in the genmake2 option file.
128    ==========================================================
129    
130     cd MITgcm/exe
131     rm *
132     cd ../bin
133     rm *
134     cp ../verification/global_with_exf/code/* .
135     cp ../ocean_inversion_project/code/* .
136     cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
137     cp ../ocean_inversion_project/write_netCDF/*  .
138    
139    ### need customized option file; example below is for nireas
140     ../tools/genmake2 -of linux_ia32_g77_netcdf
141    
142     make depend
143     make
144     cd ../exe
145     cp ../verification/global_with_exf/input/eedata .
146     cp ../verification/global_with_exf/input/data.* .
147     cp ../verification/global_with_exf/input/POLY3.COEFFS .
148     ln -sf ../verification/global_with_exf/input/*.bin .
149     cp ../ocean_inversion_project/input/* .
150     cp data.1765-2005 data
151     ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
152     ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
153     ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
154     mitgcmuv > output .txt &
155    
156    
157  ======================================================  ======================================================
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