/[MITgcm]/MITgcm_contrib/ocean_inversion_project/README
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revision 1.12 by dimitri, Tue Oct 21 03:25:30 2003 UTC revision 1.18 by dimitri, Fri Nov 28 18:16:32 2003 UTC
# Line 22  salinity initial and boundary conditions Line 22  salinity initial and boundary conditions
22    
23   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack   CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
24   cvs login ( CVS password: cvsanon )   cvs login ( CVS password: cvsanon )
25   cvs co -P MITgcm   cvs co -r checkpoint51n_branch MITgcm
26    
27  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory  2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory
28    
# Line 56  salinity initial and boundary conditions Line 56  salinity initial and boundary conditions
56    
57   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data
58   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data   diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data
59     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
60     diff PTRtave30.0000000020.001.001.data Stave.0000000020.001.001.data
61    
62    
63  ==========================================================  ==========================================================
64  Instructions for carrying out a 3000-year quasi-stationary  MPI instructions for carrying out a 3000-year quasi-stationary
65  integration using the global_ocean.90x40x15 configuration.  integration using the global_ocean.90x40x15 configuration.
66  ==========================================================  ==========================================================
67    
# Line 68  integration using the global_ocean.90x40 Line 70  integration using the global_ocean.90x40
70   cd ../bin   cd ../bin
71   rm *   rm *
72   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
73   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
74   rm PTRACERS_OPTIONS.h   rm PTRACERS_OPTIONS.h
75     cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
76     cp SIZE.h_mpi SIZE.h
77   ../tools/genmake2   ../tools/genmake2
78     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
79   make depend   make depend
# Line 83  integration using the global_ocean.90x40 Line 86  integration using the global_ocean.90x40
86   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
87   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
88   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
89   mitgcmuv > output .txt &   cp data.stationary.1 data
90     mpirun -np 24 dplace -s1 mitgcmuv < /dev/null > & ! errlog &
91    
92    
93  ==========================================================  ==========================================================
94  MPI instructions for carrying out a 3000-year quasi-stationary  Instructions for carrying out time-dependent, 1765-2005,
95  integration using the global_ocean.90x40x15 configuration.  anthropogenic carbon perturbation tracer experiments using
96    the global_ocean.90x40x15 configuration.
97  ==========================================================  ==========================================================
98    
99   cd MITgcm/exe   cd MITgcm/exe
# Line 96  integration using the global_ocean.90x40 Line 101  integration using the global_ocean.90x40
101   cd ../bin   cd ../bin
102   rm *   rm *
103   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
104   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
  rm PTRACERS_OPTIONS.h  
  cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
  cp SIZE.h_mpi SIZE.h  
105   ../tools/genmake2   ../tools/genmake2
106     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)
107   make depend   make depend
# Line 111  integration using the global_ocean.90x40 Line 112  integration using the global_ocean.90x40
112   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
113   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
114   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
115     cp data.1765-2005 data
116   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
117   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
118   mpirun -np 36 dplace -s1 -c3-38 mitgcmuv < /dev/null > & ! errlog &   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
119     mitgcmuv > output .txt &
120    
121    
122  ==========================================================  ==========================================================
123  Instructions for carrying out time-dependent, 1765-2005,  Instructions for carrying out time-dependent, 1765-2005,
124  anthropogenic carbon perturbation tracer experiments using  anthropogenic carbon perturbation tracer experiments using
125  the global_ocean.90x40x15 configuration.  global_ocean.90x40x15 configuration and netcdf output.
126    This assumes that the appropriate libnetcdf.a exists
127    and that it be specified in the genmake2 option file.
128  ==========================================================  ==========================================================
129    
130   cd MITgcm/exe   cd MITgcm/exe
# Line 127  the global_ocean.90x40x15 configuration. Line 132  the global_ocean.90x40x15 configuration.
132   cd ../bin   cd ../bin
133   rm *   rm *
134   cp ../verification/global_with_exf/code/* .   cp ../verification/global_with_exf/code/* .
  cp ../ocean_inversion_project/code/.genmakerc .  
135   cp ../ocean_inversion_project/code/* .   cp ../ocean_inversion_project/code/* .
136   ../tools/genmake2   cp PTRACERS_OPTIONS.h.netcdf PTRACERS_OPTIONS.h
137     (on orion: ../tools/genmake2 -of linux_ia64_efc+mpi)   cp ../ocean_inversion_project/write_netCDF/*  .
138    
139    ### need customized option file; example below is for nireas
140     ../tools/genmake2 -of linux_ia32_g77_netcdf
141    
142   make depend   make depend
143   make   make
144   cd ../exe   cd ../exe
# Line 139  the global_ocean.90x40x15 configuration. Line 147  the global_ocean.90x40x15 configuration.
147   cp ../verification/global_with_exf/input/POLY3.COEFFS .   cp ../verification/global_with_exf/input/POLY3.COEFFS .
148   ln -sf ../verification/global_with_exf/input/*.bin .   ln -sf ../verification/global_with_exf/input/*.bin .
149   cp ../ocean_inversion_project/input/* .   cp ../ocean_inversion_project/input/* .
150   cp data.1765-2005 data   cp data.1765-2005.1 data
151   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .   ln -sf ../ocean_inversion_project/region_mask/30reg_regionmask.bin .
152   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .   ln -sf ../ocean_inversion_project/takahashi/taka02_montlhy.bin .
153   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .   ln -sf ../ocean_inversion_project/atm_co2/splco2_cis92a.dat .
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