| 5 | Green's functions for Gruber's ocean inversion project | Green's functions for Gruber's ocean inversion project | 
| 6 | (http://quercus.igpp.ucla.edu/OceanInversion/). | (http://quercus.igpp.ucla.edu/OceanInversion/). | 
| 7 |  |  | 
|  | ===================================== |  | 
| 8 |  |  | 
| 9 | To run a pkg/ptracers test case using salt initial and boundary conditions: | =============================================== | 
| 10 |  | First check that pkg/ptracers works OK by using | 
| 11 |  | salinity initial and boundary conditions | 
| 12 |  | =============================================== | 
| 13 |  |  | 
| 14 |  | 1 ===> get MITgcm code from cvs repository | 
| 15 |  |  | 
| 16 |  | CVSROOT=:pserver:cvsanon@mitgcm.org:/u/u0/gcmpack | 
| 17 |  | cvs login ( CVS password: cvsanon ) | 
| 18 |  | cvs co MITgcm | 
| 19 |  |  | 
| 20 |  | 2 ===> put MITgcm_contrib/ocean_inversion_project in MITgcm directory | 
| 21 |  |  | 
| 22 |  | cd MITgcm | 
| 23 |  | cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project | 
| 24 |  |  | 
| 25 |  | 3 ===> compile | 
| 26 |  |  | 
| 27 |  | cd bin | 
| 28 |  | cp ../verification/global_with_exf/code/* . | 
| 29 |  | cp ../ocean_inversion_project/code/.genmakerc . | 
| 30 |  | cp ../ocean_inversion_project/code/* . | 
| 31 |  | cp ../ocean_inversion_project/code/ptracers_forcing.F.test ptracers_forcing.F | 
| 32 |  | cp ../ocean_inversion_project/code/ptracers_init.F.test ptracers_init.F | 
| 33 |  | cp ../ocean_inversion_project/code/ptracers_read_mask.F.test ptracers_read_mask.F | 
| 34 |  | ../tools/genmake | 
| 35 |  | make depend | 
| 36 |  | make | 
| 37 |  |  | 
| 38 |  | 4 ===> execute | 
| 39 |  |  | 
| 40 |  | cd ../exe | 
| 41 |  | cp ../verification/global_with_exf/input/* . | 
| 42 |  | cp ../ocean_inversion_project/input/* . | 
| 43 |  | cp ../ocean_inversion_project/input/data.ptracers.test data.ptracers | 
| 44 |  | mitgcmuv > output .txt | 
| 45 |  |  | 
| 46 |  | 5 ===> check that PTRACER output for tracer 1 and tracer 30 | 
| 47 |  | ===> is identical to salinity output | 
| 48 |  |  | 
| 49 |  | diff PTRACER01.0000000020.001.001.data S.0000000020.001.001.data | 
| 50 |  | diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data | 
| 51 |  |  | 
| 52 |  |  | 
| 53 |  | ====================================================== | 
| 54 |  | Second generate binary input files.  netcdf files are not OK | 
| 55 |  |  | 
| 56 |  | ====================================================== | 
| 57 |  | ====================================================== | 
| 58 |  | ====================================================== | 
| 59 |  | ====================================================== | 
| 60 |  |  | 
|  |  |  | 
|  |  |  | 
| 61 | cd MITgcm/bin | cd MITgcm/bin | 
| 62 | cp ../verification/global_with_exf/code/* . | cp ../verification/global_with_exf/code/* . | 
| 63 | cp ../code/.genmakerc . | cp ../code/.genmakerc . | 
| 73 | cp ../input/* . | cp ../input/* . | 
| 74 | cp ../input/data.ptracers.test data.ptracers | cp ../input/data.ptracers.test data.ptracers | 
| 75 | mitgcmuv > output .txt | mitgcmuv > output .txt | 
|  |  |  | 
|  | ===> check that PTRACER output is identical to salinity output |  | 
|  |  |  | 
|  | diff PTRACER30.0000000020.001.001.data PTRACER01.0000000020.001.001.data |  | 
|  | diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data |  | 
| 76 |  |  | 
| 77 | ===> examine interpolation output for 30-region mask | ===> examine interpolation output for 30-region mask | 
| 78 |  |  |