| 1 | dimitri | 1.1 | Ocean Inversion Project | 
| 2 |  |  | ======================= | 
| 3 |  |  |  | 
| 4 |  |  | Instructions for using pkg/ptracers to compute tracer | 
| 5 |  |  | Green's functions for Gruber's ocean inversion project | 
| 6 |  |  | (http://quercus.igpp.ucla.edu/OceanInversion/). | 
| 7 |  |  |  | 
| 8 |  |  | ===================================== | 
| 9 |  |  |  | 
| 10 |  |  | To run a pkg/ptracers test case using salt initial and boundary conditions: | 
| 11 |  |  |  | 
| 12 |  |  |  | 
| 13 |  |  |  | 
| 14 |  |  | cd MITgcm/bin | 
| 15 |  |  | cp ../verification/global_with_exf/code/* . | 
| 16 |  |  | cp ../code/.genmakerc . | 
| 17 |  |  | cp ../code/* . | 
| 18 |  |  | cp ../code/ptracers_forcing.F.test ptracers_forcing.F | 
| 19 |  |  | cp ../code/ptracers_init.F.test ptracers_init.F | 
| 20 |  |  | cp ../code/ptracers_read_mask.F.test ptracers_read_mask.F | 
| 21 |  |  | ../tools/genmake | 
| 22 |  |  | make depend | 
| 23 |  |  | make | 
| 24 |  |  | cd ../exe | 
| 25 |  |  | cp ../verification/global_with_exf/input/* . | 
| 26 |  |  | cp ../input/* . | 
| 27 |  |  | cp ../input/data.ptracers.test data.ptracers | 
| 28 |  |  | mitgcmuv > output .txt | 
| 29 |  |  |  | 
| 30 |  |  | ===> check that PTRACER output is identical to salinity output | 
| 31 |  |  |  | 
| 32 |  |  | diff PTRACER30.0000000020.001.001.data PTRACER01.0000000020.001.001.data | 
| 33 |  |  | diff PTRACER30.0000000020.001.001.data S.0000000020.001.001.data | 
| 34 |  |  |  | 
| 35 |  |  | ===> examine interpolation output for 30-region mask | 
| 36 |  |  |  | 
| 37 |  |  | matlab | 
| 38 |  |  | mask=zeros(94,44,30); | 
| 39 |  |  | load fort.10 | 
| 40 |  |  | for i=1:length(fort) | 
| 41 |  |  | mask(fort(i,2)+2,fort(i,3)+2,fort(i,1))=fort(i,4); | 
| 42 |  |  | end | 
| 43 |  |  | for i=1:30 | 
| 44 |  |  | mypcolor(mask(3:92,3:42,i)'); | 
| 45 |  |  | colorbar,title(i),pause | 
| 46 |  |  | end | 
| 47 |  |  | mypcolor(sum(mask,3)'); colorbar | 
| 48 |  |  |  | 
| 49 |  |  | ===================================== | 
| 50 |  |  |  | 
| 51 |  |  |  | 
| 52 |  |  | Global ocean experiment with ptracers | 
| 53 |  |  | ===================================== | 
| 54 |  |  |  | 
| 55 |  |  | ===> set up and integrate 30-tracer computation | 
| 56 |  |  |  | 
| 57 |  |  | cd MITgcm/bin | 
| 58 |  |  | cp ../verification/global_with_exf/code/* . | 
| 59 |  |  | cp ../code/.genmakerc . | 
| 60 |  |  | cp ../code/* . | 
| 61 |  |  | ../tools/genmake | 
| 62 |  |  | make depend | 
| 63 |  |  | make | 
| 64 |  |  | cd ../exe | 
| 65 |  |  | cp ../verification/global_with_exf/input/* . | 
| 66 |  |  | cp ../input/* . | 
| 67 |  |  | mitgcmuv > output .txt | 
| 68 |  |  |  | 
| 69 |  |  | ===> look at output | 
| 70 |  |  |  | 
| 71 |  |  | matlab | 
| 72 |  |  | for i=1:30 | 
| 73 |  |  | tr=readbin(['PTRACER' myint2str(i) ... | 
| 74 |  |  | '.0000000020.001.001.data'],[90 40 15],1); | 
| 75 |  |  | mypcolor(tr(:,:,2)'), colorbar, pause(1) | 
| 76 |  |  | end |