/[MITgcm]/MITgcm_contrib/llc_hires/llc_90/readme.txt
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Contents of /MITgcm_contrib/llc_hires/llc_90/readme.txt

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Revision 1.2 - (show annotations) (download)
Tue Oct 3 02:33:26 2017 UTC (7 years, 10 months ago) by dimitri
Branch: MAIN
Changes since 1.1: +53 -33 lines
File MIME type: text/plain 
This code and instructions were tested to work on pleiades with checkpoint65v
There is something not quite right about checkpoint65v dumpfreq output.
For example, 2D output files are 421080 instead of 421200 long.
1 # This is a small test case with set-up as similar as possible
2 # to llc_4320 for testing asyncio and coupling to GEOS-5.
3
4 # request interactive nodes
5 qsub -I -q long -l select=6:ncpus=28:model=bro,walltime=120:00:00
6
7 #################################################
8 # 30x30x96 configuration no asyncio checkpoint65v
9 module purge
10 module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
11 cd ~/geos5/asyncio
12 cvs co -r checkpoint65v MITgcm_code
13 cvs co MITgcm_contrib/llc_hires/llc_90
14 cd MITgcm
15 mkdir build run1
16 cd build
17 rm *
18 ../tools/genmake2 -of \
19 ../../MITgcm_contrib/llc_hires/llc_90/code/linux_amd64_ifort+mpi_ice_nas \
20 -mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code
21 make depend
22 make -j 96
23 cp mitgcmuv ../run1
24 cd ../run1
25 ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
26 ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
27 ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
28 cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
29 mpiexec -n 96 ./mitgcmuv
30
31 ###################################################
32 # 30x30x96 configuration with asyncio checkpoint65v
33 cd ~/geos5/asyncio/MITgcm
34 mkdir run2
35 cd build
36 rm *
37 ../tools/genmake2 -of \
38 ../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
39 '../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async'
40 make depend
41 make -j 96
42 cp mitgcmuv ../run2
43 cd ../run2
44 ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
45 ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
46 ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
47 cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
48 mpiexec -n 124 ./mitgcmuv
49
50 ############################################
51 # 30x30x96 configuration with asyncio latest
52 cd ~/geos5/asyncio/MITgcm
53 mkdir run2
54 cd build
55 rm *
56 ../tools/genmake2 -of \
57 ../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
58 '../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async'
59 make depend
60 make -j 96
61 cp mitgcmuv ../run2
62 cd ../run2
63 ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
64 ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
65 ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
66 cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
67 mpiexec -n 124 ./mitgcmuv
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