/[MITgcm]/MITgcm_contrib/llc_hires/llc_90/readme.txt
ViewVC logotype

Diff of /MITgcm_contrib/llc_hires/llc_90/readme.txt

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.1 by dimitri, Tue Oct 3 00:09:12 2017 UTC revision 1.5 by dimitri, Fri Oct 19 19:24:06 2018 UTC
# Line 1  Line 1 
1  # This is a small test case with set-up as similar as possible  # This is a small test case with set-up as similar as possible
2  # to llc_4320 for testing asyncio and coupling to GEOS-5.  # to llc_4320 for testing asyncio and coupling to GEOS-5.
3    
4  #############################  # request interactive nodes and load modules
5  # 30x30x96 configuration  qsub -I -q long -l select=6:ncpus=28:model=bro,walltime=120:00:00
   
6  module purge  module purge
7  module load comp-intel/2015.0.090 mpi-sgi/mpt.2.12r23 netcdf/4.0  module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
8  cd ~/llc_4320  
9  cvs co -r checkpoint65v MITgcm_code  ########################################
10  cvs co MITgcm_contrib/llc_hires/llc_4320  # 30x30x96 configuration without asyncio
11    cvs co -D "2013/08/21 00:25:30" MITgcm_code
12    cvs co MITgcm_contrib/llc_hires/llc_90
13  cd MITgcm  cd MITgcm
14  mkdir build run485568  mkdir build run1
 lfs setstripe -c -1 run_485568  
15  cd build  cd build
16  rm *  rm *
17  cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h_90x90x19023 SIZE.h  ../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas \
18  cp ../../MITgcm_contrib/llc_hires/llc_4320/code-async/readtile_mpiio.c .   -mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code
 emacs readtile_mpiio.c  
     tileSizeX = 90;  
     tileSizeY = 90;  
 ../tools/genmake2 -of \  
  ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \  
  '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'  
19  make depend  make depend
20  make -j 16  make -j 16
21  cp mitgcmuv ../run_485568/mitgcmuv_90x90x19023_intel.2015.0.090  cp mitgcmuv ../run1
22    cd ../run1
23  qsub -I -q long -l select=850:ncpus=24:model=has,walltime=120:00:00 -m abe -M menemenlis@me.com  ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
 qsub -I -q long -l select=1020:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M menemenlis@me.com  
 module load comp-intel/2015.0.090 mpi-sgi/mpt.2.12r23 netcdf/4.0  
 ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .  
24  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
25  cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .  ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
26  cp data.exch2_90x90x19023 data.exch2  cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
27  mv STDOUT.00000 STDOUT.485568  mpiexec -n 96 ./mitgcmuv
 emacs data  
  nIter0=485568,  
 ln -sf ../run/pickup_0000485568.data pickup.0000485568.data  
 ln -sf ../run/pickup_0000485568.meta pickup.0000485568.meta  
 ln -sf ../run/pickup_seaice_0000485568.data pickup_seaice.0000485568.data  
 ln -sf ../run/pickup_seaice_0000485568.meta pickup_seaice.0000485568.meta  
 mpiexec -n 20400 ./mitgcmuv_90x90x19023_intel.2015.0.090  
28    
29  cd ~/llc_4320/MITgcm/run_485568  #####################################
30  tail -f STDOUT.00000 | grep advcfl_W  # 30x30x96 configuration with asyncio
31    mkdir run2
32    cd build
33    rm *
34    ../tools/genmake2 -of \
35     ../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
36     '../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async'
37    make depend
38    make -j 16
39    cp mitgcmuv ../run2
40    cd ../run2
41    ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
42    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
43    ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
44    cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
45    mpiexec -n 124 ./mitgcmuv
46    
47    ###################################################
48    # 30x30x96 configuration with asyncio and no seaice
49    mkdir run3
50    cd build
51    rm *
52    ../tools/genmake2 -of \
53     ../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas \
54      -mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code-async-noseaice
55    make depend
56    make -j 16
57    cp mitgcmuv ../run3
58    cd ../run3
59    ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
60    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
61    ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
62    cp ../../MITgcm_contrib/llc_hires/llc_90/input-noseaice/* .
63    mpiexec -n 124 ./mitgcmuv
Legend:
Removed from v.1.1  
changed lines
  Added in v.1.5
  ViewVC Help
Powered by ViewVC 1.1.22