/[MITgcm]/MITgcm_contrib/llc_hires/llc_4320/readme.txt
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revision 1.5 by dimitri, Fri Nov 1 16:51:49 2013 UTC revision 1.6 by dimitri, Mon Nov 4 11:10:26 2013 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email
3  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email
4  qsub -I -q long -l select=300:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M email
5  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00  qsub -I -q long -l select=300:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email
 qsub -q ecco -I -W group_list=g26209 -l select=1000:ncpus=20:aoe=sles11,walltime=100:00:00 -m abe -M menemenlis@jpl.nasa.gov  
   
   
 For batch submission:  
 qsub -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 runscript  
 qsub qsub_llc2160.csh  
   
 ==============  
   
 cd ~/llc_4320  
 cvs co MITgcm_code  
 cvs co MITgcm_contrib/llc_hires/llc_4320  
 cd MITgcm  
 module purge  
 module load comp-intel/2012.0.032 mpi-sgi/mpt.2.08r7 netcdf/4.0  
 mkdir build run  
 lfs setstripe -c -1 run  
 cd build  
 cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h_90x90x19023 SIZE.h  
 ../tools/genmake2 -of \  
  ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \  
  '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'  
 make depend  
 make -j 8  
 cd ../run  
 ln -sf ../build/mitgcmuv .  
 ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .  
 ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  
 cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .  
 mv data.exch2_90x90x19023 data.exch2  
 ln -sf pickup_llc1080_14jan2011_4320x56160x543_r4 pickup.0000060480.data  
 ln -sf pickup_seaice_llc1080_14jan2011_4320x56160x543_r4 pickup_seaice.0000060480.data  
 mpiexec -n 35000 ./mitgcmuv  
6    
7  ==============  ==============
8    
# Line 64  mpiexec -n 35000 ./mitgcmuv Line 31  mpiexec -n 35000 ./mitgcmuv
31    
32  ==============  ==============
33    
 cvs co MITgcm_code  
 cd MITgcm  
 module purge  
 module load comp-intel/2012.0.032 mpi-sgi/mpt.2.06r6 netcdf/4.0  
 mkdir build run  
 lfs setstripe -c -1 run  
 cd build  
 cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h  
 _180x180x5015 SIZE.h  
 ../tools/genmake2 -of ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \  
  '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'  
 make depend  
 make -j 16  
 cd ../run  
 ln -sf ../build/mitgcmuv .  
 ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .  
 ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  
 cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .  
 mv data.exch2_72x72x29297 data.exch2  
 mpiexec -n 32000 ./mitgcmuv  
   
 ==============  
   
34  look at output  look at output
35    
36  for ts=[0 120 600:10:980 1080:120:2280]  for ts=[0 120 600:10:980 1080:120:2280]
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