/[MITgcm]/MITgcm_contrib/llc_hires/llc_4320/readme.txt
ViewVC logotype

Diff of /MITgcm_contrib/llc_hires/llc_4320/readme.txt

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.13 by dimitri, Fri Jun 27 13:56:32 2014 UTC revision 1.14 by dimitri, Sat Apr 2 01:27:56 2016 UTC
# Line 1  Line 1 
1    #############################
2    # 90x90x19023 configuration
3    
4    qsub -I -q alphatst -l select=850:ncpus=24:model=has,walltime=8:00:00 -m abe -M menemenlis@me.com
5    
6    module purge
7    module load comp-intel/2015.0.090 test/mpt.2.11r8 netcdf/4.0
8    
9    cd ~/llc_4320/MITgcm/build
10    rm *
11    cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h_90x90x19023 SIZE.h
12    cp ../../MITgcm_contrib/llc_hires/llc_4320/code-async/readtile_mpiio.c .
13    emacs readtile_mpiio.c
14        tileSizeX = 90;
15        tileSizeY = 90;
16    ../tools/genmake2 -of \
17     ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
18     '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'
19    make depend
20    make -j 16
21    
22    cd ~/llc_4320/MITgcm/run
23    cp ../build/mitgcmuv mitgcmuv_90x90x19023_intel.2015.0.090
24    cp data.exch2_90x90x19023 data.exch2
25    
26    cd ~/llc_4320/MITgcm/run
27    mv STDOUT.00000 STDOUT.409536
28    emacs data
29     nIter0=409536,
30    mv pickup_0000409536.data pickup.0000409536.data
31    mv pickup_0000409536.meta pickup.0000409536.meta
32    mv pickup_seaice_0000409536.data pickup_seaice.0000409536.data
33    mv pickup_seaice_0000409536.meta pickup_seaice.0000409536.meta
34    
35    cd ~/llc_4320/MITgcm/run
36    module purge
37    module load comp-intel/2015.0.090 test/mpt.2.11r8 netcdf/4.0
38    cp data.exch2_90x90x19023 data.exch2
39    mpiexec -n 20400 ./mitgcmuv_90x90x19023_intel.2015.0.090
40    
41    tail -f STDOUT.00000 | grep advcfl_W
42    
43    
44    #############################
45    qsub -I -q alphatst -l select=850:ncpus=24:model=has,walltime=8:00:00 -m abe -M menemenlis@me.com
46    qsub -I -q alphatst -l select=497:ncpus=24:model=has,walltime=8:00:00 -m abe -M menemenlis@me.com
47    
48    qsub -I -q alphatst -l select=497:ncpus=24:model=has,walltime=8:00:00 -m abe -M menemenlis@me.com
49    module purge
50    module load comp-intel/2015.0.090 mpi-sgi/mpt.2.10r6 netcdf/4.0
51    
52    module load comp-intel/2015.0.090 test/mpt.2.11r8 netcdf/4.0
53    
54    cd ~/llc_4320/MITgcm/build
55    rm *
56    cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h_120x120x19023 SIZE.h
57    cp ../../MITgcm_contrib/llc_hires/llc_4320/code-async/readtile_mpiio.c .
58    emacs readtile_mpiio.c
59        tileSizeX = 120;
60        tileSizeY = 120;
61    cp ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas .
62    emacs linux_amd64_ifort+mpi_ice_nas
63        FOPTIM='-O3 -ipo -axCORE-AVX2,AVX -xSSE4.1 -ip -fp-model precise -traceback -ftz'
64    ../tools/genmake2 -of linux_amd64_ifort+mpi_ice_nas -mpi -mods \
65     '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'
66    make depend
67    make -j 16
68    
69    cd ~/llc_4320/MITgcm/run
70    cp ../build/mitgcmuv mitgcmuv_120x120x10901_AVX2
71    
72    mv STDOUT.00000 STDOUT.428544
73    emacs data
74     nIter0=428544,
75    mv pickup_0000428544.data pickup.0000428544.data
76    mv pickup_0000428544.meta pickup.0000428544.meta
77    mv pickup_seaice_0000428544.data pickup_seaice.0000428544.data
78    mv pickup_seaice_0000428544.meta pickup_seaice.0000428544.meta
79    
80    cd ~/llc_4320/MITgcm/run
81    module purge
82    module load comp-intel/2015.0.090 test/mpt.2.11r8 netcdf/4.0
83    cp data.exch2_120x120x10901 data.exch2
84    mpiexec -n 12000 ./mitgcmuv_120x120x10901_Avx2
85    
86    
87  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
88  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email
89  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email
# Line 32  cp ../build/mitgcmuv mitgcmuv_90x90x1902 Line 118  cp ../build/mitgcmuv mitgcmuv_90x90x1902
118  ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .  ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .
119  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
120  cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .  cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .
121  mv data.exch2_90x90x19023 data.exch2  cp data.exch2_90x90x19023 data.exch2
122  emacs data  emacs data
123    
124  export MPI_BUFS_PER_PROC=1024  export MPI_BUFS_PER_PROC=1024
# Line 51  tail -f STDOUT.00000 | grep advcfl_W Line 137  tail -f STDOUT.00000 | grep advcfl_W
137    
138  module purge  module purge
139  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0
140  cd /nobackupp8/dmenemen/llc/llc_4320_new  cd ~/llc_4320
141  cvs co MITgcm_code  cvs co MITgcm_code
142  cvs co MITgcm_contrib/llc_hires/llc_4320  cvs co MITgcm_contrib/llc_hires/llc_4320
143  cd MITgcm  cd MITgcm
Legend:
Removed from v.1.13  
changed lines
  Added in v.1.14
  ViewVC Help
Powered by ViewVC 1.1.22