/[MITgcm]/MITgcm_contrib/llc_hires/llc_2160/readme.txt
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revision 1.9 by dimitri, Thu Mar 13 15:35:03 2014 UTC revision 1.10 by dimitri, Fri Jun 27 14:06:37 2014 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M YOUR_EMAIL_HERE
3  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M YOUR_EMAIL_HERE
4  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M menemenlis@me.com  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE
5  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE
6    
7  #############################  #############################
8  # 60x60x10882 configuration  # 60x60x10882 configuration
9    
10  qsub -I -q long -l select=600:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M menemenlis@me.com  qsub -I -q long -l select=600:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE
11  module purge  module purge
12  module load  comp-intel/2012.0.032 netcdf/4.0  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0
 module use -a ~kjtaylor/modulefiles  
 module load sles11sp3/mpt-2.10-nasa201311271217  
13  cd ~/llc_2160  cd ~/llc_2160
14  cvs co MITgcm_code  cvs co MITgcm_code
15  cvs co MITgcm_contrib/llc_hires/llc_2160  cvs co MITgcm_contrib/llc_hires/llc_2160
# Line 35  cp ../build/mitgcmuv mitgcmuv_60x60x1088 Line 33  cp ../build/mitgcmuv mitgcmuv_60x60x1088
33  ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .  ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .
34  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
35  cp ../../MITgcm_contrib/llc_hires/llc_2160/input/* .  cp ../../MITgcm_contrib/llc_hires/llc_2160/input/* .
36  mv ../../MITgcm_contrib/llc_hires/llc_2160/input/data.exch2_60x60x10882 data.exch2  cp ../../MITgcm_contrib/llc_hires/llc_2160/input/data.exch2_60x60x10882 data.exch2
37  emacs data  emacs data
38    
39  export MPI_BUFS_PER_PROC=1024  export MPI_BUFS_PER_PROC=1024
# Line 49  mpiexec -n 12000 ./mitgcmuv_60x60x10882 Line 47  mpiexec -n 12000 ./mitgcmuv_60x60x10882
47    
48  tail -f STDOUT.00000 | grep advcfl_W  tail -f STDOUT.00000 | grep advcfl_W
49    
50    ################################################
51    # 144x144x2047 configuration for grid generation
52    
53    qsub -I -q devel -l select=103:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M YOUR_EMAIL_HERE
54    module purge
55    module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0
56    cd ~/llc_2160
57    cvs co MITgcm_code
58    cvs co MITgcm_contrib/llc_hires/llc_2160
59    cd MITgcm
60    mkdir build run_grid
61    lfs setstripe -c -1 run_grid
62    cd build
63    cp ../../MITgcm_contrib/llc_hires/llc_2160/code/SIZE.h_144x144x2047 SIZE.h
64    ../tools/genmake2 -of \
65     ../../MITgcm_contrib/llc_hires/llc_2160/code-async/linux_amd64_ifort+mpi_ice_nas \
66     -mpi  -mods ../../MITgcm_contrib/llc_hires/llc_2160/code
67    make depend
68    make -j 16
69    
70    cd ~/llc_2160/MITgcm/run_grid
71    cp ../build/mitgcmuv mitgcmuv_144x144x2047
72    ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .
73    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
74    cp ../../MITgcm_contrib/llc_hires/llc_2160/input/* .
75    cp ../../MITgcm_contrib/llc_hires/llc_2160/input/data.exch2_144x144x2047 data.exch2
76    
77    emacs data
78     debuglevel=3,
79     useSingleCPUio=.TRUE.,
80     endtime=0.,
81     deltaT = 1.,
82    
83    mpiexec -n 2047 ./mitgcmuv_144x144x2047
84    
85  ==============  ==============
86    
87  cd ~/llc_2160  cd ~/llc_2160
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