/[MITgcm]/MITgcm_contrib/llc_hires/llc_2160/readme.txt
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revision 1.7 by dimitri, Mon Jan 27 03:25:39 2014 UTC revision 1.8 by dimitri, Thu Mar 6 02:00:00 2014 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email
3  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email
4  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M email  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M menemenlis@me.com
5  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email
6    
7  #############################  #############################
# Line 14  module use -a ~kjtaylor/modulefiles Line 14  module use -a ~kjtaylor/modulefiles
14  module load sles11sp3/mpt-2.10-nasa201311271217  module load sles11sp3/mpt-2.10-nasa201311271217
15  cd ~/llc_2160  cd ~/llc_2160
16  cvs co MITgcm_code  cvs co MITgcm_code
17  cvs co MITgcm_contrib/llc_hires/llc_4320  cvs co MITgcm_contrib/llc_hires/llc_2160
18  cd MITgcm  cd MITgcm
19  mkdir build run  mkdir build run
20  lfs setstripe -c -1 run  lfs setstripe -c -1 run
# Line 30  emacs readtile_mpiio.c Line 30  emacs readtile_mpiio.c
30  make depend  make depend
31  make -j 16  make -j 16
32    
33  cd ~/llc_2160/MITgcm/run  cd ~/llc_2160/MITgcm/run_day49_on
34  cp ../build/mitgcmuv mitgcmuv_60x60x10882  cp ../build/mitgcmuv mitgcmuv_60x60x10882
35  ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .  ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .
36  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
# Line 44  export MPI_GROUP_MAX=1024 Line 44  export MPI_GROUP_MAX=1024
44  export MPI_NUM_MEMORY_REGIONS=8  export MPI_NUM_MEMORY_REGIONS=8
45  export MPI_UNBUFFERED_STDIO=1  export MPI_UNBUFFERED_STDIO=1
46  export MPI_MEMMAP_OFF=1  export MPI_MEMMAP_OFF=1
47    export MPI_UD_TIMEOUT=100
48  mpiexec -n 12000 ./mitgcmuv_60x60x10882  mpiexec -n 12000 ./mitgcmuv_60x60x10882
49    
50  tail -f STDOUT.00000 | grep advcfl_W  tail -f STDOUT.00000 | grep advcfl_W
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