/[MITgcm]/MITgcm_contrib/llc_hires/llc_1080/readme.txt
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revision 1.6 by dimitri, Tue Oct 29 07:20:16 2013 UTC revision 1.9 by dimitri, Wed Nov 6 18:12:56 2013 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=24:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M menemenlis@jpl.nasa.gov  qsub -I -q devel -l select=170:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email
3  qsub -I -q long -l select=80:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M menemenlis@jpl.nasa.gov  qsub -I -q long  -l select=170:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M email
4  qsub -I -q long -l select=:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00  qsub -I -q long  -l select=170:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email
 qsub -q ecco -I -W group_list=g26209 -l select=170:ncpus=20:aoe=sles11,walltime=100:00:00 -m abe -M menemenlis@jpl.nasa.gov  
   
 For batch submission:  
 qsub -q devel -l select=24:ncpus=20:model=ivy,walltime=02:00:00 runscript  
 qsub qsub_llc1080_468.csh  
5    
6  ==============  ==============
7    # 60x60x2872 tile configuration
8    
9  cd ~/llc_1080  cd ~/llc_1080
10  cvs co MITgcm_code  cvs co MITgcm_code
11  cvs co MITgcm_contrib/llc_hires/llc_1080  cvs co MITgcm_contrib/llc_hires/llc_1080
12  cd MITgcm  cd MITgcm
13  module purge  module purge
14  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.06rp16  netcdf/4.0  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.08r7 netcdf/4.0
15  mkdir build run  mkdir build run
16  lfs setstripe -c -1 run  lfs setstripe -c -1 run
17  cd build  cd build
# Line 25  cp ../../MITgcm_contrib/llc_hires/llc_10 Line 21  cp ../../MITgcm_contrib/llc_hires/llc_10
21   '../../MITgcm_contrib/llc_hires/llc_1080/code ../../MITgcm_contrib/llc_hires/llc_1080/code-async'   '../../MITgcm_contrib/llc_hires/llc_1080/code ../../MITgcm_contrib/llc_hires/llc_1080/code-async'
22  make depend  make depend
23  make -j 16  make -j 16
24  cd ../run  cd ~/llc_1080/MITgcm/run
25  ln -sf ../build/mitgcmuv .  ln -sf ../build/mitgcmuv .
26  ln -sf /nobackup/dmenemen/tarballs/llc_1080/run_template/* .  ln -sf /nobackup/dmenemen/tarballs/llc_1080/run_template/* .
27  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
28  cp ../../MITgcm_contrib/llc_hires/llc_1080/input/* .  cp ../../MITgcm_contrib/llc_hires/llc_1080/input/* .
29  mv data.exch2_60x60x2872 data.exch2  mv data.exch2_60x60x2872 data.exch2
30    export MPI_NUM_MEMORY_REGIONS=256
31  mpiexec -n 3400 ./mitgcmuv  mpiexec -n 3400 ./mitgcmuv
32    
33  ==============  ==============
34    # 90x90x1342 tile configuration
35    
36  cd ~/llc_1080  cd ~/llc_1080
37  cvs co MITgcm_code  cvs co MITgcm_code
# Line 58  ln -sf /nobackup/dmenemen/tarballs/llc_1 Line 56  ln -sf /nobackup/dmenemen/tarballs/llc_1
56  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
57  cp ../../MITgcm_contrib/llc_hires/llc_1080/input/* .  cp ../../MITgcm_contrib/llc_hires/llc_1080/input/* .
58  mv data.exch2_90x90x1342 data.exch2  mv data.exch2_90x90x1342 data.exch2
59    export MPI_NUM_MEMORY_REGIONS=256
60  mpiexec -n 1600 ./mitgcmuv  mpiexec -n 1600 ./mitgcmuv
61    
62  ==============  ==============
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