1 |
jmc |
1.1 |
#!/bin/sh |
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3 |
jmc |
1.7 |
# $Header: /u/gcmpack/MITgcm_contrib/jmc_script/tst_2+2_cpl,v 1.6 2009/09/14 18:52:21 jmc Exp $ |
4 |
jmc |
1.2 |
# $Name: $ |
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6 |
jmc |
1.3 |
rnp_loc() |
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{ |
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# rnp_loc arg_1 arg_2 |
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# rename files with prefix = 'arg_1' to files with prefix = 'arg_2' |
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echo 'rnp_loc:' $1 $2 |
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# rnp -s $1 $2 |
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jmc |
1.4 |
listY=`ls -1 $1*` |
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for yy in $listY |
14 |
jmc |
1.3 |
do |
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jmc |
1.4 |
zz=`echo $yy | sed "s/^$1/$2/"` |
16 |
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mv $yy $zz |
17 |
jmc |
1.3 |
done |
18 |
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} |
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dif_tiles() |
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{ |
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jmc |
1.4 |
# dif_data_loc dd1 dd2 file |
23 |
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# for all tiles ==> do diff dd1/file dd2/file' |
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dd1=$1 ; dd2=$2 ; zz=$3 |
25 |
jmc |
1.3 |
chkmeta='Y' |
26 |
jmc |
1.4 |
listY=`(cd $dd1 ; ls $zz.*.data | sed "s/$zz\.//" | sed "s/\.data//")` |
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echo '--> file='$zz', listY='$listY |
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for yy in $listY |
29 |
jmc |
1.3 |
do |
30 |
jmc |
1.4 |
echo diff $dd1/$zz.$yy.data $dd2 |
31 |
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diff $dd1/$zz.$yy.data $dd2 |
32 |
jmc |
1.3 |
out=$? |
33 |
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if test $out != 0 |
34 |
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then echo 'Diff outp=' $out ' ==> stop' |
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exit ; fi |
36 |
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if test $chkmeta = 'Y' |
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then |
38 |
jmc |
1.4 |
echo diff $dd1/$zz.$yy.meta $dd2 |
39 |
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diff $dd1/$zz.$yy.meta $dd2 |
40 |
jmc |
1.3 |
out=$? |
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if test $out != 0 |
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then echo 'Diff outp=' $out ' ==> stop' |
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exit ; fi |
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fi |
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done |
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} |
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48 |
jmc |
1.2 |
if test -f input_ocn/data.tst |
49 |
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then |
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noc0=`sed -n 's/nIter0=//p' input_ocn/data.tst | sed 's/,//g' | sed 's/ //g'` |
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Dbl=`sed -n 's/nTimeSteps=//p' input_ocn/data.tst | sed 's/,//g'` |
52 |
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NiOc=`expr $Dbl / 2` |
53 |
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Nit=$NiOc |
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else |
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echo " file: 'input_ocn/data.tst' not found" |
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NiOc=0 ; Nit=2 |
57 |
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fi |
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if test -f input_atm/data.tst |
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then |
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nat0=`sed -n 's/nIter0=//p' input_atm/data.tst | sed 's/,//g' | sed 's/ //g'` |
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Dbl=`sed -n 's/nTimeSteps=//p' input_atm/data.tst | sed 's/,//g'` |
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NiAt=`expr $Dbl / 2` |
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else |
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echo " file: 'input_atm/data.tst' not found" |
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NiAt=0 |
66 |
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fi |
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jmc |
1.1 |
|
68 |
jmc |
1.7 |
#- parse options: |
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CMD='run_cpl_test' |
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MTH= |
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argList=$* |
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for xx in $argList |
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do |
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if test $xx = '-mth' ; then MTH=$xx ; shift ; continue ; fi |
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if test -x ${CMD}_$xx ; then CMD="${CMD}_$xx" ; shift ; continue ; fi |
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done |
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if [ $# -ne 1 ] |
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then |
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echo "Usage: `basename $0` [opt] flag" |
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echo " Check restart of coupled set-up: compare 1 run of 2 x $Nit it long" |
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echo " with 2 consecutive runs of $Nit it long each" |
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echo "opt = -mth : run script '$CMD' with option '-mth'" |
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echo "opt = sufx : run script 'run_cpl_test_{sufx}'" |
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echo " where: flag = 0 -> prepare for 1rst run" |
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echo " flag = r1 -> do 1rst run and step 1" |
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echo " flag = 1 -> move res. after 1rst run & prepare for 2nd" |
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echo " flag = r2 -> do 2nd run and step 2" |
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echo " flag = 2 -> move res. after 2nd run & prepare for 3rd" |
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echo " flag = r3 -> do 3rd run and step 3" |
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echo " flag = 3 -> move res. after 3rd run" |
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echo " flag=(r)N+ , N=1,2,3 => do steps (+run) from: (r)N to 3" |
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echo " flag = 4 -> compare Ocean results" |
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echo " flag = 5 -> compare Atmos results" |
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echo " flag = 6 -> diff pickup files" |
96 |
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exit |
97 |
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fi |
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jmc |
1.2 |
if test $NiAt = 0 -o $NiOc = 0 |
99 |
jmc |
1.7 |
then |
100 |
jmc |
1.2 |
echo " needs 2 data files: 'input_ocn/data.tst' & 'input_atm/data.tst'" |
101 |
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echo " (corresponding to 1rst run) to continue" |
102 |
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exit |
103 |
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fi |
104 |
jmc |
1.7 |
arg1=$1 |
105 |
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xx=`echo $arg1 | sed 's/\+$//'` |
106 |
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if test $xx != $arg1 |
107 |
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then kUp=`echo $xx | sed 's/^r//'` ; arg1=$xx |
108 |
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else kUp=9 ; fi |
109 |
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xx=`echo $arg1 | sed 's/^r//'` |
110 |
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if test $xx != $arg1 ; then doRun=1 ; arg1=$xx ; else doRun=0 ; fi |
111 |
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ksel=$arg1 |
112 |
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113 |
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CMD="./${CMD} $MTH 3" |
114 |
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echo " doRun='$doRun' ; ksel='$ksel' ; kUp='$kUp' ; command='$CMD'" |
115 |
jmc |
1.1 |
|
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#make sure that local dir & ~jmc/bin is in the path: |
117 |
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#export PATH=${PATH}:. |
118 |
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119 |
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Nit=$NiOc |
120 |
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Dbl=`expr $Nit + $Nit` |
121 |
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noc1=`expr $noc0 + $Nit` |
122 |
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noc2=`expr $noc0 + $Dbl` |
123 |
jmc |
1.3 |
noc0c=`printf "%10.10i\n" $noc0` |
124 |
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noc1c=`printf "%10.10i\n" $noc1` |
125 |
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noc2c=`printf "%10.10i\n" $noc2` |
126 |
jmc |
1.7 |
echo ' Oce (rank_1):' $noc0 $noc1 $noc2 |
127 |
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echo ' ' $noc0c $noc1c $noc2c |
128 |
jmc |
1.1 |
|
129 |
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Nit=$NiAt |
130 |
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Dbl=`expr $Nit + $Nit` |
131 |
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nat1=`expr $nat0 + $Nit` |
132 |
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nat2=`expr $nat0 + $Dbl` |
133 |
jmc |
1.3 |
nat0c=`printf "%10.10i\n" $nat0` |
134 |
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nat1c=`printf "%10.10i\n" $nat1` |
135 |
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nat2c=`printf "%10.10i\n" $nat2` |
136 |
jmc |
1.7 |
echo ' Atm (rank_2):' $nat0 $nat1 $nat2 |
137 |
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echo ' ' $nat0c $nat1c $nat2c |
138 |
jmc |
1.1 |
|
139 |
jmc |
1.6 |
listOc="pickup" |
140 |
jmc |
1.1 |
listAt="pickup pickup_cpl pickup_ic pickup_land" |
141 |
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142 |
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#- dir where to put the results : |
143 |
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dir1=res_2it |
144 |
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dir2=res_1iA |
145 |
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dir3=res_1iB |
146 |
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147 |
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#-- after a run, rename pickup file to restart |
148 |
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if test $ksel = 0 |
149 |
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then |
150 |
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echo ' ' |
151 |
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cd rank_1 |
152 |
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for xx in $listOc |
153 |
jmc |
1.3 |
do rnp_loc $xx.ckptA $xx.$noc0c |
154 |
jmc |
1.1 |
done |
155 |
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cd ../rank_2 |
156 |
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for xx in $listAt |
157 |
jmc |
1.3 |
do rnp_loc $xx.ckptA $xx.$nat0c |
158 |
jmc |
1.1 |
done |
159 |
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cd .. |
160 |
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#-- prepare for running Dbl |
161 |
jmc |
1.7 |
echo '=> prepare for running Dbl:' |
162 |
jmc |
1.1 |
Dbl=`expr $NiOc + $NiOc` |
163 |
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sed "1 s/[0-9]*/$Dbl/" input_cpl/data > rank_0/data |
164 |
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cp -p input_ocn/data.tst rank_1/data |
165 |
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cp -p input_atm/data.tst rank_2/data |
166 |
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echo 'rank_0/data:' `head -1 rank_0/data` |
167 |
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egrep 'nIter0|nTimeSteps' rank_?/data |
168 |
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fi |
169 |
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170 |
jmc |
1.7 |
#-- run & post-process Dbl: |
171 |
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if [ $ksel -eq 1 -o $kUp -le 1 ] |
172 |
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then |
173 |
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echo ' ' |
174 |
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#-- run coupled test (Dbl): |
175 |
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if [ $doRun -eq 1 -o $kUp -lt 1 ] |
176 |
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then |
177 |
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echo "=> run (Dbl): $CMD" |
178 |
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$CMD |
179 |
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fi |
180 |
jmc |
1.1 |
#-- after running Dbl: |
181 |
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rm -rf $dir1 |
182 |
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mkdir $dir1 |
183 |
jmc |
1.7 |
echo '=> move STDOUT to' $dir1 |
184 |
jmc |
1.1 |
mv rank_1/STDOUT* $dir1/ocnSTDOUT.2it |
185 |
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mv rank_2/STDOUT* $dir1/atmSTDOUT.2it |
186 |
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187 |
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mkdir $dir1/ocn |
188 |
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cd rank_1 |
189 |
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for xx in $listOc |
190 |
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do |
191 |
jmc |
1.3 |
rnp_loc $xx.ckptA $xx.$noc2c |
192 |
jmc |
1.1 |
done |
193 |
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echo 'move pickups to' $dir1/ocn |
194 |
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mv pickup*.$noc2c.* ../$dir1/ocn |
195 |
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cd .. |
196 |
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197 |
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mkdir $dir1/atm |
198 |
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cd rank_2 |
199 |
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for xx in $listAt |
200 |
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do |
201 |
jmc |
1.3 |
rnp_loc $xx.ckptA $xx.$nat2c |
202 |
jmc |
1.1 |
done |
203 |
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echo 'move pickups to' $dir1/atm |
204 |
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mv pickup*.$nat2c.* ../$dir1/atm |
205 |
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cd .. |
206 |
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207 |
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#-- prepare for running 1iA |
208 |
jmc |
1.7 |
echo '=> prepare for running 1iA:' |
209 |
jmc |
1.1 |
Nit=$NiOc |
210 |
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Dbl=`expr $Nit + $Nit` |
211 |
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sed "1 s/[0-9]*/$Nit/" input_cpl/data > rank_0/data |
212 |
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sed "s/^ nTimeSteps=$Dbl/ nTimeSteps=$Nit/g" input_ocn/data.tst > rank_1/data |
213 |
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Nit=$NiAt |
214 |
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Dbl=`expr $Nit + $Nit` |
215 |
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sed "s/^ nTimeSteps=$Dbl/ nTimeSteps=$Nit/g" input_atm/data.tst > rank_2/data |
216 |
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echo 'rank_0/data:' `head -1 rank_0/data` |
217 |
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egrep 'nIter0|nTimeSteps' rank_?/data |
218 |
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fi |
219 |
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220 |
jmc |
1.7 |
#-- run & post-process 1iA: |
221 |
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if [ $ksel -eq 2 -o $kUp -le 2 ] |
222 |
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then |
223 |
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echo ' ' |
224 |
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#-- run coupled test (1iA): |
225 |
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if [ $doRun -eq 1 -o $kUp -lt 2 ] |
226 |
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then |
227 |
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echo "=> run (1iA): $CMD" |
228 |
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$CMD |
229 |
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fi |
230 |
jmc |
1.1 |
#-- after running 1iA |
231 |
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rm -rf $dir2 |
232 |
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mkdir $dir2 |
233 |
jmc |
1.7 |
echo '=> move STDOUT to' $dir2 |
234 |
jmc |
1.1 |
mv rank_1/STDOUT* $dir2/ocnSTDOUT.1iA |
235 |
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mv rank_2/STDOUT* $dir2/atmSTDOUT.1iA |
236 |
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237 |
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mkdir $dir2/ocn |
238 |
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cd rank_1 |
239 |
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for xx in $listOc |
240 |
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do |
241 |
jmc |
1.3 |
rnp_loc $xx.ckptA $xx.$noc1c |
242 |
jmc |
1.1 |
done |
243 |
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echo 'move pickups to' $dir2/ocn |
244 |
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mv pickup*.$noc1c.* ../$dir2/ocn |
245 |
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cd .. |
246 |
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247 |
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mkdir $dir2/atm |
248 |
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cd rank_2 |
249 |
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for xx in $listAt |
250 |
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do |
251 |
jmc |
1.3 |
rnp_loc $xx.ckptA $xx.$nat1c |
252 |
jmc |
1.1 |
done |
253 |
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echo 'move pickups to' $dir2/atm |
254 |
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mv pickup*.$nat1c.* ../$dir2/atm |
255 |
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cd .. |
256 |
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257 |
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#-- prepare for running 1iB |
258 |
jmc |
1.7 |
echo '=> prepare for running 1iB:' |
259 |
jmc |
1.1 |
cd rank_1 |
260 |
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sed "s/^ nIter0=$noc0/ nIter0=$noc1/g" data > data.tmp |
261 |
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mv -f data.tmp data |
262 |
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ln -s ../$dir2/ocn/* . |
263 |
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cd ../rank_2 |
264 |
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sed "s/^ nIter0=$nat0/ nIter0=$nat1/g" data > data.tmp |
265 |
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mv -f data.tmp data |
266 |
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ln -s ../$dir2/atm/* . |
267 |
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cd .. |
268 |
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echo 'rank_0/data:' `head -1 rank_0/data` |
269 |
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egrep 'nIter0|nTimeSteps' rank_?/data |
270 |
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fi |
271 |
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272 |
jmc |
1.7 |
#-- run & post-process 1iB: |
273 |
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if [ $ksel -eq 3 -o $kUp -le 3 ] |
274 |
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then |
275 |
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echo ' ' |
276 |
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#-- run coupled test (1iB): |
277 |
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if [ $doRun -eq 1 -o $kUp -lt 3 ] |
278 |
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then |
279 |
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echo "=> run (1iB): $CMD" |
280 |
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$CMD |
281 |
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fi |
282 |
jmc |
1.1 |
#-- after running 1iB |
283 |
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rm -rf $dir3 |
284 |
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mkdir $dir3 |
285 |
jmc |
1.7 |
echo '=> move STDOUT to' $dir3 |
286 |
jmc |
1.1 |
mv rank_1/STDOUT* $dir3/ocnSTDOUT.1iB |
287 |
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mv rank_2/STDOUT* $dir3/atmSTDOUT.1iB |
288 |
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289 |
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mkdir $dir3/ocn |
290 |
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cd rank_1 |
291 |
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for xx in $listOc |
292 |
jmc |
1.3 |
do rnp_loc $xx.ckptA $xx.$noc2c |
293 |
jmc |
1.1 |
done |
294 |
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echo 'move pickups to' $dir3/ocn |
295 |
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mv pickup*.$noc2c.* ../$dir3/ocn |
296 |
jmc |
1.5 |
rm -f pickup*.$noc1c.* |
297 |
jmc |
1.1 |
cd .. |
298 |
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|
299 |
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mkdir $dir3/atm |
300 |
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cd rank_2 |
301 |
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for xx in $listAt |
302 |
jmc |
1.3 |
do rnp_loc $xx.ckptA $xx.$nat2c |
303 |
jmc |
1.1 |
done |
304 |
|
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echo 'move pickups to' $dir3/atm |
305 |
|
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mv pickup*.$nat2c.* ../$dir3/atm |
306 |
jmc |
1.5 |
rm -f pickup*.$nat1c.* |
307 |
jmc |
1.1 |
cd .. |
308 |
jmc |
1.7 |
echo '=> restore std data files' |
309 |
jmc |
1.1 |
cp -p input_cpl/data rank_0 |
310 |
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cp -p input_ocn/data rank_1 |
311 |
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cp -p input_atm/data rank_2 |
312 |
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fi |
313 |
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|
314 |
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#-- compare output: |
315 |
|
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if test $ksel = 4 |
316 |
|
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then |
317 |
|
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rm -f ocn.txt |
318 |
|
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echo ' run 2it: ---------- ' > tmp1.txt |
319 |
|
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grep "cg2d_init_res" $dir1/ocnSTDOUT.2it \ |
320 |
|
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| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
321 |
|
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Nit=`expr $NiOc + 2` |
322 |
|
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sed "$Nit i \ ... 2it continue ..." tmp1.txt > tmp2.txt |
323 |
|
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rm -f tmp1.txt |
324 |
|
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echo ' run 1iA: ---------- ' > tmp1.txt |
325 |
|
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grep "cg2d_init_res" $dir2/ocnSTDOUT.1iA \ |
326 |
|
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| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
327 |
|
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echo ' run 1iB: ---------- ' >> tmp1.txt |
328 |
|
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grep "cg2d_init_res" $dir3/ocnSTDOUT.1iB \ |
329 |
|
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| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
330 |
|
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nl tmp1.txt > tmp1.ttt |
331 |
|
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nl tmp2.txt > tmp2.ttt |
332 |
|
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join tmp1.ttt tmp2.ttt | sed 's/[0-9]*//' > ocn.txt |
333 |
|
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rm -f tmp1.ttt tmp2.ttt tmp1.txt tmp2.txt |
334 |
|
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echo ' ' ; echo '-- compare cg2d_init_res (Ocean):' |
335 |
|
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cat ocn.txt |
336 |
|
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exit |
337 |
|
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fi |
338 |
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|
339 |
|
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if test $ksel = 5 |
340 |
|
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then |
341 |
|
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rm -f atm.txt |
342 |
|
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echo ' run 2it: ---------- ' > tmp1.txt |
343 |
|
|
grep "cg2d_init_res" $dir1/atmSTDOUT.2it \ |
344 |
|
|
| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
345 |
|
|
Nit=`expr $NiAt + 2` |
346 |
|
|
sed "$Nit i \ ... 2it continue ..." tmp1.txt > tmp2.txt |
347 |
|
|
rm -f tmp1.txt |
348 |
|
|
echo ' run 1iA: ---------- ' > tmp1.txt |
349 |
|
|
grep "cg2d_init_res" $dir2/atmSTDOUT.1iA \ |
350 |
|
|
| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
351 |
|
|
echo ' run 1iB: ---------- ' >> tmp1.txt |
352 |
|
|
grep "cg2d_init_res" $dir3/atmSTDOUT.1iB \ |
353 |
|
|
| sed 's/.* cg2d_init_res =//' >> tmp1.txt |
354 |
|
|
nl tmp1.txt > tmp1.ttt |
355 |
|
|
nl tmp2.txt > tmp2.ttt |
356 |
|
|
join tmp1.ttt tmp2.ttt | sed 's/[0-9]*//' > atm.txt |
357 |
|
|
rm -f tmp1.ttt tmp2.ttt tmp1.txt tmp2.txt |
358 |
|
|
echo ' ' ; echo '-- compare cg2d_init_res (Atmos):' |
359 |
|
|
cat atm.txt |
360 |
|
|
exit |
361 |
|
|
fi |
362 |
|
|
|
363 |
|
|
#- compare pickup file: |
364 |
|
|
if test $ksel = 6 |
365 |
|
|
then |
366 |
|
|
echo ' ' ; echo '=== compare Ocn pickups: ==============' |
367 |
|
|
for xx in $listOc |
368 |
|
|
do |
369 |
jmc |
1.3 |
dif_tiles $dir1/ocn $dir3/ocn $xx.$noc2c |
370 |
jmc |
1.1 |
done |
371 |
|
|
echo ' ' ; echo '=== compare Atm pickups: ==============' |
372 |
|
|
for xx in $listAt |
373 |
|
|
do |
374 |
jmc |
1.3 |
dif_tiles $dir1/atm $dir3/atm $xx.$nat2c |
375 |
jmc |
1.1 |
done |
376 |
|
|
exit |
377 |
|
|
fi |