Annotation of /MITgcm_contrib/jmc_script/tst1+1

#!/bin/sh

# $Header: /u/gcmpack/MITgcm_contrib/jmc_script/tst1+1,v 1.9 2007/10/24 16:14:28 jmc Exp $
# $Name:  $

# Nit = Nb of iter of 2nd & 3rd run (1rst one is 2 x Nit iter long)
Dbl=`sed -n 's/nTimeSteps=//p' data.tst | sed 's/,//g'`
Nit=`expr $Dbl / 2`
#Nit=2

case $# in
  1) ;;
   *) echo "Usage: `basename $0` flag"
      echo " Check restart: compare 1 run of 2 x $Nit it long"
      echo "     with 2 consecutive runs of $Nit it long each"
      echo " where: flag = 1 -> do the 3 run"
      echo "        flag = 2 -> compare std_outp"
      echo "        flag = 3 -> compare pickup files"
      exit ;;
esac
flag=$1

#- input :
# 1) data.tst = parameter file "data" for 2.Nit iter run
# 2) in dir temp : pickup(_cd).0..0{num0}.001.001.data

num0=`sed -n 's/nIter0=//p' data.tst | sed 's/,//g' | sed 's/ //g'`
#num0="72000"

# list of pickup(s) that are needed for a restart :
#listP='pickup pickup_cd pickup_nh pickup_ic pickup_land pickup_seaice'

mpi=0
if [ $mpi -ge 1 ]
then gcmExc=run_ifc_mpi
else gcmExc=mitgcmuv
fi

#- dir where to put the results :
dir1=res_2it
dir2=res_1iA
dir3=res_1iB

#make sure that local dir is in the path:
export PATH=${PATH}:.

#---------------------------
Dbl=`expr $Nit + $Nit`
num1=`expr $num0 + $Nit`
num2=`expr $num0 + $Dbl`
num0c=`add0upto10c $num0`
num1c=`add0upto10c $num1`
num2c=`add0upto10c $num2`
echo $num0 $num1 $num2
echo $num0c $num1c $num2c
echo 'gcmExc='$gcmExc
# exit
#------------------------

if test $flag = 1 ; then
#------------
if test -d $dir1 -o -d $dir2 -o  -d $dir3
then echo -n 'remove dir: '
 if test -d $dir1 ; then echo -n $dir1 ' , ' ; rm -r $dir1 ; fi
 if test -d $dir2 ; then echo -n $dir2 ' , ' ; rm -r $dir2 ; fi
 if test -d $dir3 ; then echo -n $dir3 ' , ' ; rm -r $dir3 ; fi
 echo ' '
fi
mkdir $dir1 $dir2 $dir3
rm -f STDERR.0000

cp -p data.tst data
numF=`ls temp/pickup*.${num0c}* 2> /dev/null | grep -c pickup`
if test $numF != 0 ; then ln -s temp/pickup*.${num0c}* . ; fi
echo '==> START RUN 2 x' $Nit 'it'
if [ $mpi -ge 1 ]
then ./$gcmExc std_outp.2it > TTT.out.2it 2>&1
else ./$gcmExc > std_outp.2it
fi
mv STDERR.0000 std__err.2it
if test -f pickup.ckptA.001.001.data
then out=`egrep -c 'STOP ABNORMAL END' std_outp.2it`
else out=9 ; fi
if test $out != 0 ; then echo 'RUN 2it STOP before END => exit' ; exit ; fi
echo '==>  END  RUN 2 x' $Nit 'it'
listP=`ls pickup*.ckptA* | sed 's/\..*//g' | uniq`
echo ' listP=' $listP
for xx in $listP
do
 rnp -s $xx.ckptA $xx.$num2c
done
mv *.0??.0??.* $dir1
txtF=`ls -1 *.txt 2> /dev/null`
mv R?.data R?.meta DR?.data DR?.meta $txtF $dir1
listS=`ls $dir1/pickup*.${num0c}* 2> /dev/null | head -1`
if test "x$listS" != x ; then mv $dir1/pickup*.${num0c}* . ; fi
#--
sed "s/^ nTimeSteps=$Dbl/ nTimeSteps=$Nit/g" data.tst > data
echo '==> START RUN 1iA'
if [ $mpi -ge 1 ]
then ./$gcmExc std_outp.1iA > TTT.out.1iA 2>&1
else ./$gcmExc > std_outp.1iA
fi
mv STDERR.0000 std__err.1iA
if test -f pickup.ckptA.001.001.data
then out=`egrep -c 'STOP ABNORMAL END' std_outp.1iA`
else out=9 ; fi
if test $out != 0 ; then echo 'RUN 1iA STOP before END => exit' ; exit ; fi
echo '==>  END  RUN 1iA'
for xx in $listP
do
 rnp -s $xx.ckptA $xx.$num1c
done
mv *.0??.0??.* $dir2
txtF=`ls -1 *.txt 2> /dev/null`
mv R?.data R?.meta DR?.data DR?.meta $txtF $dir2
listS=`ls $dir2/pickup*.${num0c}* 2> /dev/null | head -1`
if test "x$listS" != x ; then rm $dir2/pickup*.${num0c}* ; fi
#--
ln -s $dir2/pickup*.$num1c.* .
sed "s/^ nIter0=$num0/ nIter0=$num1/g" data > data.tmp
mv -f data.tmp data
echo '==> START RUN 1iB'
if [ $mpi -ge 1 ]
then ./$gcmExc std_outp.1iB > TTT.out.1iB 2>&1
else ./$gcmExc > std_outp.1iB
fi
mv STDERR.0000 std__err.1iB
if test -f pickup.ckptA.001.001.data
then out=`egrep -c 'STOP ABNORMAL END' std_outp.1iB`
else out=9 ; fi
if test $out != 0 ; then echo 'RUN 1iB STOP before END => exit' ; exit ; fi
echo '==>  END  RUN 1iB'
for xx in $listP
do
 rnp -s $xx.ckptA $xx.$num2c
done
mv *.0??.0??.* $dir3
txtF=`ls -1 *.txt 2> /dev/null`
mv R?.data R?.meta DR?.data DR?.meta $txtF $dir3
rm $dir3/pickup*.$num1c.*
exit
#------------
fi

if test $flag = 2 ; then
#------------
echo ' ' ; echo '-- compare cg2d_init_res :'
echo ' run 1iA:'
 grep "cg2d_init_res" std_outp.1iA \
      | sed 's/.* cg2d_init_res =//'
echo ' run 1iB:'
 grep "cg2d_init_res" std_outp.1iB \
      | sed 's/.* cg2d_init_res =//'
echo ' run 2it:'
 grep "cg2d_init_res" std_outp.2it \
      | sed 's/.* cg2d_init_res =//'
exit
#------------
fi

if test $flag = 3 ; then
#------------
difex=`ls ~jmc/bin/dif_data`
listP=`( cd $dir1 ; ls pickup*.$num2c* | sed 's/\..*//g' | uniq )`
for xx in $listP
do
 $difex $dir1 $dir3 $xx.$num2c
done
exit
#------------
fi
1	jmc	1.1	#!/bin/sh
2
3	jmc	1.10	# $Header: /u/gcmpack/MITgcm_contrib/jmc_script/tst1+1,v 1.9 2007/10/24 16:14:28 jmc Exp $
4	jmc	1.6	# $Name: $
5
6	jmc	1.2	# Nit = Nb of iter of 2nd & 3rd run (1rst one is 2 x Nit iter long)
7	jmc	1.4	Dbl=`sed -n 's/nTimeSteps=//p' data.tst \| sed 's/,//g'`
8			Nit=`expr $Dbl / 2`
9			#Nit=2
10	jmc	1.2
11			case $# in
12			1) ;;
13			*) echo "Usage: `basename $0` flag"
14			echo " Check restart: compare 1 run of 2 x $Nit it long"
15			echo " with 2 consecutive runs of $Nit it long each"
16			echo " where: flag = 1 -> do the 3 run"
17			echo " flag = 2 -> compare std_outp"
18			echo " flag = 3 -> compare pickup files"
19			exit ;;
20			esac
21			flag=$1
22
23	jmc	1.5	#- input :
24	jmc	1.2	# 1) data.tst = parameter file "data" for 2.Nit iter run
25	jmc	1.1	# 2) in dir temp : pickup(_cd).0..0{num0}.001.001.data
26
27	jmc	1.4	num0=`sed -n 's/nIter0=//p' data.tst \| sed 's/,//g' \| sed 's/ //g'`
28			#num0="72000"
29	jmc	1.1
30	jmc	1.2	# list of pickup(s) that are needed for a restart :
31	jmc	1.7	#listP='pickup pickup_cd pickup_nh pickup_ic pickup_land pickup_seaice'
32	jmc	1.5
33			mpi=0
34			if [ $mpi -ge 1 ]
35			then gcmExc=run_ifc_mpi
36			else gcmExc=mitgcmuv
37			fi
38	jmc	1.1
39			#- dir where to put the results :
40			dir1=res_2it
41			dir2=res_1iA
42			dir3=res_1iB
43	jmc	1.5
44			#make sure that local dir is in the path:
45			export PATH=${PATH}:.
46
47	jmc	1.1	#---------------------------
48	jmc	1.2	Dbl=`expr $Nit + $Nit`
49			num1=`expr $num0 + $Nit`
50			num2=`expr $num0 + $Dbl`
51	jmc	1.1	num0c=`add0upto10c $num0`
52			num1c=`add0upto10c $num1`
53			num2c=`add0upto10c $num2`
54			echo $num0 $num1 $num2
55	jmc	1.5	echo $num0c $num1c $num2c
56	jmc	1.2	echo 'gcmExc='$gcmExc
57	jmc	1.1	# exit
58			#------------------------
59	jmc	1.2
60			if test $flag = 1 ; then
61			#------------
62	jmc	1.9	if test -d $dir1 -o -d $dir2 -o -d $dir3
63			then echo -n 'remove dir: '
64			if test -d $dir1 ; then echo -n $dir1 ' , ' ; rm -r $dir1 ; fi
65			if test -d $dir2 ; then echo -n $dir2 ' , ' ; rm -r $dir2 ; fi
66			if test -d $dir3 ; then echo -n $dir3 ' , ' ; rm -r $dir3 ; fi
67			echo ' '
68			fi
69	jmc	1.2	mkdir $dir1 $dir2 $dir3
70	jmc	1.9	rm -f STDERR.0000
71	jmc	1.2
72	jmc	1.1	cp -p data.tst data
73	jmc	1.7	numF=`ls temp/pickup.${num0c} 2> /dev/null \| grep -c pickup`
74			if test $numF != 0 ; then ln -s temp/pickup.${num0c} . ; fi
75	jmc	1.2	echo '==> START RUN 2 x' $Nit 'it'
76	jmc	1.5	if [ $mpi -ge 1 ]
77			then ./$gcmExc std_outp.2it > TTT.out.2it 2>&1
78	jmc	1.9	else ./$gcmExc > std_outp.2it
79	jmc	1.5	fi
80	jmc	1.9	mv STDERR.0000 std__err.2it
81	jmc	1.5	if test -f pickup.ckptA.001.001.data
82	jmc	1.2	then out=`egrep -c 'STOP ABNORMAL END' std_outp.2it`
83			else out=9 ; fi
84	jmc	1.1	if test $out != 0 ; then echo 'RUN 2it STOP before END => exit' ; exit ; fi
85	jmc	1.2	echo '==> END RUN 2 x' $Nit 'it'
86	jmc	1.9	listP=`ls pickup.ckptA \| sed 's/\..*//g' \| uniq`
87			echo ' listP=' $listP
88	jmc	1.1	for xx in $listP
89			do
90	jmc	1.4	rnp -s $xx.ckptA $xx.$num2c
91	jmc	1.1	done
92	jmc	1.3	mv .0??.0??. $dir1
93	jmc	1.8	txtF=`ls -1 *.txt 2> /dev/null`
94			mv R?.data R?.meta DR?.data DR?.meta $txtF $dir1
95	jmc	1.9	listS=`ls $dir1/pickup.${num0c} 2> /dev/null \| head -1`
96			if test "x$listS" != x ; then mv $dir1/pickup.${num0c} . ; fi
97	jmc	1.1	#--
98	jmc	1.2	sed "s/^ nTimeSteps=$Dbl/ nTimeSteps=$Nit/g" data.tst > data
99	jmc	1.5	echo '==> START RUN 1iA'
100			if [ $mpi -ge 1 ]
101			then ./$gcmExc std_outp.1iA > TTT.out.1iA 2>&1
102	jmc	1.9	else ./$gcmExc > std_outp.1iA
103	jmc	1.5	fi
104	jmc	1.9	mv STDERR.0000 std__err.1iA
105	jmc	1.5	if test -f pickup.ckptA.001.001.data
106	jmc	1.2	then out=`egrep -c 'STOP ABNORMAL END' std_outp.1iA`
107			else out=9 ; fi
108	jmc	1.1	if test $out != 0 ; then echo 'RUN 1iA STOP before END => exit' ; exit ; fi
109			echo '==> END RUN 1iA'
110			for xx in $listP
111			do
112	jmc	1.4	rnp -s $xx.ckptA $xx.$num1c
113	jmc	1.1	done
114	jmc	1.3	mv .0??.0??. $dir2
115	jmc	1.8	txtF=`ls -1 *.txt 2> /dev/null`
116			mv R?.data R?.meta DR?.data DR?.meta $txtF $dir2
117	jmc	1.9	listS=`ls $dir2/pickup.${num0c} 2> /dev/null \| head -1`
118	jmc	1.10	if test "x$listS" != x ; then rm $dir2/pickup.${num0c} ; fi
119	jmc	1.1	#--
120	jmc	1.5	ln -s $dir2/pickup.$num1c. .
121	jmc	1.10	sed "s/^ nIter0=$num0/ nIter0=$num1/g" data > data.tmp
122			mv -f data.tmp data
123	jmc	1.5	echo '==> START RUN 1iB'
124			if [ $mpi -ge 1 ]
125			then ./$gcmExc std_outp.1iB > TTT.out.1iB 2>&1
126	jmc	1.9	else ./$gcmExc > std_outp.1iB
127	jmc	1.5	fi
128	jmc	1.9	mv STDERR.0000 std__err.1iB
129	jmc	1.5	if test -f pickup.ckptA.001.001.data
130	jmc	1.2	then out=`egrep -c 'STOP ABNORMAL END' std_outp.1iB`
131			else out=9 ; fi
132	jmc	1.1	if test $out != 0 ; then echo 'RUN 1iB STOP before END => exit' ; exit ; fi
133			echo '==> END RUN 1iB'
134			for xx in $listP
135			do
136	jmc	1.4	rnp -s $xx.ckptA $xx.$num2c
137	jmc	1.1	done
138	jmc	1.3	mv .0??.0??. $dir3
139	jmc	1.8	txtF=`ls -1 *.txt 2> /dev/null`
140			mv R?.data R?.meta DR?.data DR?.meta $txtF $dir3
141	jmc	1.1	rm $dir3/pickup.$num1c.
142	jmc	1.2	exit
143			#------------
144			fi
145
146			if test $flag = 2 ; then
147			#------------
148	jmc	1.1	echo ' ' ; echo '-- compare cg2d_init_res :'
149			echo ' run 1iA:'
150			grep "cg2d_init_res" std_outp.1iA \
151			\| sed 's/.* cg2d_init_res =//'
152			echo ' run 1iB:'
153			grep "cg2d_init_res" std_outp.1iB \
154			\| sed 's/.* cg2d_init_res =//'
155			echo ' run 2it:'
156			grep "cg2d_init_res" std_outp.2it \
157	jmc	1.5	\| sed 's/.* cg2d_init_res =//'
158	jmc	1.1	exit
159	jmc	1.2	#------------
160			fi
161
162			if test $flag = 3 ; then
163			#------------
164	jmc	1.4	difex=`ls ~jmc/bin/dif_data`
165	jmc	1.9	listP=`( cd $dir1 ; ls pickup.$num2c \| sed 's/\..*//g' \| uniq )`
166	jmc	1.2	for xx in $listP
167			do
168			$difex $dir1 $dir3 $xx.$num2c
169			done
170			exit
171			#------------
172			fi