/[MITgcm]/MITgcm_contrib/jmc_script/run_cpl_test.aces
ViewVC logotype

Diff of /MITgcm_contrib/jmc_script/run_cpl_test.aces

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.2 by jmc, Mon Aug 1 23:52:33 2011 UTC revision 1.3 by jmc, Tue Nov 8 22:58:22 2011 UTC
# Line 43  dir=`pwd` Line 43  dir=`pwd`
43  # need to be on one computer node,  # need to be on one computer node,
44  #  and with the correct module loaded (i.e, one of the 3):  #  and with the correct module loaded (i.e, one of the 3):
45  # > module load mpich/gnu  # > module load mpich/gnu
46    #   export MPI_INC_DIR='/usr/local/pkg/mpich/mpich-gcc/include'
47  # > module load mpich/intel netcdf/3.6.1/icc  # > module load mpich/intel netcdf/3.6.1/icc
48  #   export MPI_INC_DIR='/usr/local/pkg/mpich/mpich-intel/include/'  #   export MPI_INC_DIR='/usr/local/pkg/mpich/mpich-intel/include'
49  # > module load mpich/pgi  # > module load mpich/pgi
50    #   export MPI_INC_DIR='/usr/local/pkg/mpich/mpich-pgi/include'
51    #   export NETCDF_ROOT='/usr/local/pkg/pgi/pgi-5.2/linux86/5.2'
52    
53  if test 'dummy'$PBS_NODEFILE = 'dummy'  if test 'dummy'$PBS_NODEFILE = 'dummy'
54  then  then
55    echo ' $PBS_NODEFILE not defined'    echo ' $PBS_NODEFILE not defined'
# Line 90  then Line 94  then
94   module list -t >& tmp_compiler   module list -t >& tmp_compiler
95   compiler=`sed -n 's/mpich.*\///p' tmp_compiler`   compiler=`sed -n 's/mpich.*\///p' tmp_compiler`
96   case $compiler in   case $compiler in
97    'gnu')   OPTFILE="../../tools/build_options/linux_ia32_g77+mpi_aces" ;;    'gnu')   OPTFILE="../../tools/build_options/linux_ia32_g77" ;;
98    'intel') OPTFILE="../../tools/build_options/linux_ia32_ifort+mpi_aces" ;;    'intel') OPTFILE="../../tools/build_options/linux_ia32_ifort" ;;
99    'pgi')   OPTFILE="../../tools/build_options/linux_ia32_pgf77+mpi_aces" ;;    'pgi')   OPTFILE="../../tools/build_options/linux_ia32_pgf77" ;;
100     *) echo 'ERROR: cannot use compiler:' $compiler ;     *) echo 'ERROR: cannot use compiler:' $compiler ;
101        echo ""; cat tmp_compiler ; exit 7 ;;        echo ""; cat tmp_compiler ; exit 7 ;;
102   esac   esac
# Line 225  then Line 229  then
229      if [ $nc -le $NpOc ] ; then dd1=ocn ; else dd1=atm ; fi      if [ $nc -le $NpOc ] ; then dd1=ocn ; else dd1=atm ; fi
230      nn=1      nn=1
231    done    done
232      NpAt=`expr $Npr - 1 - $NpOc`
233      RunOpt="-np 1 ./build_cpl/mitgcmuv"
234      RunOpt="$RunOpt : -np $NpOc ./build_ocn/mitgcmuv"
235      RunOpt="$RunOpt : -np $NpAt ./build_atm/mitgcmuv"
236    
237    cd $ROOTDIR    cd $ROOTDIR
238    if test "x$MTH" != x ; then    if test "x$MTH" != x ; then
# Line 237  then Line 245  then
245      fi      fi
246      echo ""      echo ""
247    fi    fi
248  # /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1    mpich=`which mpirun`
249  #- with mpich-1 (on danton, ACES):    echo $mpich | grep 'mpich-mx' > /dev/null 2>&1
250    mpirun -p4pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1    mpichmx=$?
251  #- with mpich-mx (on beagle):    echo $mpich | grep 'mpich2' > /dev/null 2>&1
252  # mpirun -pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1    mpich2=$?
253      if test $mpich2 == 0 ; then
254      #- with Hydra mpich2 (on baudelaire):
255        echo "execute 'mpirun $RunOpt' :"
256        mpirun $RunOpt  > std_outp 2>&1
257      elif test $mpichmx == 0 ; then
258      #- with mpich-mx (on beagle):
259        echo "execute 'mpirun -pg pr_group -v ./build_cpl/mitgcmuv' :"
260        mpirun -pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1
261      else
262      # /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1
263      #- with mpich-1 (on danton, ACES):
264        echo "execute 'mpirun -p4pg pr_group -v ./build_cpl/mitgcmuv' :"
265        mpirun -p4pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1
266      fi
267    tail -20 std_outp    tail -20 std_outp
268    ls -l rank_$rnkO/pickup*.ckptA.001.001.data    ls -l rank_$rnkO/pickup*.ckptA.001.001.data
269    ls -l rank_$rnkA/pickup*.ckptA.001.001.data    ls -l rank_$rnkA/pickup*.ckptA.001.001.data
# Line 250  fi Line 272  fi
272    
273  if test $kpr = 4  if test $kpr = 4
274  then  then
275     CompRes="$HOME/bin/comp_res"
276    
277   if test -f rank_$rnkO/STDOUT.0000   if test -f rank_$rnkO/STDOUT.0000
278   then echo '==> check Ocean output:'   then echo '==> check Ocean output:'
279      /home/jmc/bin/comp_res rank_$rnkO/STDOUT.0000 results/ocnSTDOUT.0000      $CompRes rank_$rnkO/STDOUT.0000 results/ocnSTDOUT.0000
280      mv -f comp_res.log comp_res.ocn      mv -f comp_res.log comp_res.ocn
281      echo ' '      echo ' '
282   else echo "No Ocean output file in rank_$rnkO" ; fi   else echo "No Ocean output file in rank_$rnkO" ; fi
# Line 261  then Line 284  then
284   if test -f rank_$rnkA/STDOUT.0000   if test -f rank_$rnkA/STDOUT.0000
285   then   then
286      echo '==> check Atmos output:'      echo '==> check Atmos output:'
287      /home/jmc/bin/comp_res rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000      $CompRes rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000
288      mv -f comp_res.log comp_res.atm      mv -f comp_res.log comp_res.atm
289      echo '==> check Land output:'      echo '==> check Land output:'
290      /home/jmc/bin/comp_res rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000 L      $CompRes rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000 L
291      mv -f comp_res.log comp_res.land      mv -f comp_res.log comp_res.land
292      echo '==> check thSIce output:'      echo '==> check thSIce output:'
293      /home/jmc/bin/comp_res rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000 I      $CompRes rank_$rnkA/STDOUT.0000 results/atmSTDOUT.0000 I
294      mv -f comp_res.log comp_res.sice      mv -f comp_res.log comp_res.sice
295      echo ' '      echo ' '
296   else echo "No Atmos output file in rank_$rnkA" ; fi   else echo "No Atmos output file in rank_$rnkA" ; fi
Legend:
Removed from v.1.2  
changed lines
  Added in v.1.3
  ViewVC Help
Powered by ViewVC 1.1.22