| 1 |
Some basic scripts are gather here. |
Some basic scripts are gather here. |
| 2 |
They are not specially design to be general and obviously |
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| 3 |
need to be modified/customized for each application. |
a) the restart test : "2+2=4" |
| 4 |
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| 5 |
a) the restart test : "1+1=2" |
script: tst_2+2 |
| 6 |
script: tst1+1 |
- to use in a run dir. after a successful "testreport" |
| 7 |
call 2 short scripts: rnp & add0upto10c |
- input argument: '0','1','2','3','4' or 'All': |
| 8 |
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proceed step by step or all steps at once |
| 9 |
* no input argument but few comments within the file tst1+1 |
- tst_2+2 (no argument) -> print "usage" |
| 10 |
(needs to be edited and modify). |
- know problems: specific restart procedure (with fizhi pkg or offline pkg) |
| 11 |
* an example of data.tst file is provided |
not yet implemented |
| 12 |
Note: the script is sensitive to space and upper-case / lower |
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| 13 |
case characters regarding nIter0 line and nTimeSteps line. |
script: do_test_2+2 |
| 14 |
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- call restart test "tst_2+2" multiple times, in every test experiment. |
| 15 |
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- needs to be in MITgcm/verification (with a copy of tst_2+2i script) |
| 16 |
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and can only be used after a successful "testreport" |
| 17 |
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- do_test_2+2 -help -> print "usage" |
| 18 |
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| 19 |
script: tst_2+2_cpl |
script: tst_2+2_cpl |
| 20 |
= version adapted for coupled set-up (verification/cpl_aim+ocn) |
= version of tst_2+2 adapted for coupled set-up (verification/cpl_aim+ocn) |
| 21 |
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| 22 |
b) PBS-batch script that re-submit itself (loop). |
b) PBS-batch script that re-submit itself (loop). |
| 23 |
script: runScript |
script: runScript |
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call 2 short scripts: add0upto3c & add0upto10c |
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| 24 |
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| 25 |
* used (and tested) on myrinet-3 cluster. |
- used (and tested) on myrinet-3 cluster. |
| 26 |
* suffer from a lack of meaningful comments. |
- suffer from a lack of meaningful comments. |
| 27 |
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- not specially design to be general and obviously |
| 28 |
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need to be modified/customized for each set-up. |
| 29 |
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| 30 |
c) A short script to split the ASCII Diagnostics-Stats output file |
c) A short script to split the ASCII Diagnostics-Stats output file |
| 31 |
into separated files (one per field) that are easy to read/load |
into separated files (one per field) that are easy to read/load |
| 32 |
(e.g., in matlab, just use "load" command) |
(e.g., in matlab, just use "load" command) |
| 33 |
script: extract_StD |
script: extract_StD |
| 34 |
no known dependency |
no known dependency |
| 35 |
+ A matlab script to load in 1 array all the separated files: |
+ A matlab script to load in 1 array all the separated files: |
| 36 |
matlab-script: read_StD |
matlab-script: read_StD |
| 37 |
no known dependency |
no known dependency |
| 38 |
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| 39 |
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d) script: rn_pickup |
| 40 |
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- Rename 'pickup*.ckpt[A,B].*' files to 'pickup*.[10-digits-iter].*' |
| 41 |
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with several selection options |
| 42 |
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- rn_pickup (no argument) -> print "usage" |
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