| 1 | Some basic scripts are gather here. | Some basic scripts are gather here. | 
| 2 |  |  | 
| 3 | a) the restart test : "2+2=4" | a) the restart test: "2+2=4" | 
| 4 |  |  | 
| 5 | script: tst_2+2 | script: tst_2+2 | 
| 6 | - to use in a run dir. after a successful "testreport" | - to use in a run dir. after a successful "testreport" | 
| 16 | and can only be used after a successful "testreport" | and can only be used after a successful "testreport" | 
| 17 | - do_test_2+2 -help -> print "usage" | - do_test_2+2 -help -> print "usage" | 
| 18 |  |  | 
| 19 |  | NOTE: scripts "tst_2+2" & "do_test_2+2" have been moved (Dec 25, 2007) | 
| 20 |  | to: MITgcm/tools/ | 
| 21 |  |  | 
| 22 | script: tst_2+2_cpl | script: tst_2+2_cpl | 
| 23 | = version of tst_2+2 adapted for coupled set-up (verification/cpl_aim+ocn) | = version of tst_2+2 adapted for coupled set-up (verification/cpl_aim+ocn) | 
| 24 |  |  | 
| 35 | (e.g., in matlab, just use "load" command) | (e.g., in matlab, just use "load" command) | 
| 36 | script: extract_StD | script: extract_StD | 
| 37 | no known dependency | no known dependency | 
| 38 | + A matlab script to load in 1 array all the separated files: | +  A matlab script to load in 1 array all the separated files: | 
| 39 | matlab-script: read_StD | matlab-script: read_StD.m | 
| 40 | no known dependency | no known dependency | 
| 41 |  | +  2 example scripts to make simple plots from Stat-Diags output: | 
| 42 |  | matlab-script: grph_StD.m (uses read_StD.m) | 
| 43 |  | matlab-script: plot_StD.m (uses read_StD.m, c_levs.m) | 
| 44 |  |  | 
| 45 | d) script: rn_pickup | d) script: rn_pickup | 
| 46 | - Rename 'pickup*.ckpt[A,B].*' files to 'pickup*.[10-digits-iter].*' | - Rename 'pickup*.ckpt[A,B].*' files to 'pickup*.[10-digits-iter].*' | 
| 47 | with several selection options | with several selection options. | 
| 48 | - rn_pickup (no argument) -> print "usage" | - rn_pickup (no argument) -> print "usage" | 
| 49 |  |  | 
| 50 |  | e) script: mk_mkfile | 
| 51 |  | - run genmake2 with the same options as when "Makefile" was generated | 
| 52 |  | (needs an existing previous "Makefile") ; this replaces "make makefile". | 
| 53 |  | in addition, link *_mpi files from the MODS directory when -mpi was | 
| 54 |  | used to generate the previous Makefile. | 
| 55 |  |  | 
| 56 |  | f) script: derive_other_types | 
| 57 |  | from 1 src file, derive other type (R4,RS,RL,RS) version. For now, can | 
| 58 |  | only be applied to the 4 src files: "mdsio_pass_r{4,8}tor{l,s}.F" | 
| 59 |  |  | 
| 60 |  | g) script: mk_options_list | 
| 61 |  | generate list of CPP Options used in Fortran source files | 
| 62 |  |  | 
| 63 |  | ---------------------------------------------------------------------- | 
| 64 |  | shell & matlab scripts to process MONITOR output from STDOUT files | 
| 65 |  | and make simple time-serie plots: | 
| 66 |  | -------------------- | 
| 67 |  | a) shell script: select_MON | 
| 68 |  | get all MONITOR output from a single file and split into many | 
| 69 |  | single-variable output files (easier to load and plot) | 
| 70 |  |  | 
| 71 |  | b) shell scripts: do_extract_MON & extract_MON | 
| 72 |  | collect into a single file all MONITOR output from consecutive | 
| 73 |  | STDOUT output files (from a single experiment with one of more restart) | 
| 74 |  |  | 
| 75 |  | c) matlab script: grph_MON.m | 
| 76 |  | plot MONITOR time-serie of one or more experiment (with lines of different | 
| 77 |  | color). Note: experiment with larger number of records needs to come first. | 
| 78 |  | Uses: read_MON.m | 
| 79 |  | to load-in single-variable output files (--> many files per experiment) | 
| 80 |  | and/or: readnc_MON.m | 
| 81 |  | to load-in netcdf (MNC) MONITOR output files |