4 |
#PBS -j oe |
#PBS -j oe |
5 |
#PBS -q special |
#PBS -q special |
6 |
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7 |
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#====>>> REPLACE FOLLOWING LINE WITH CORRECT RUNTIME DIRECTORY <<<==== |
8 |
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cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run |
9 |
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|
10 |
setenv MPI_USE_XPMEM |
setenv MPI_USE_XPMEM |
11 |
setenv MPI_DSM_CPULIST 4-219 |
setenv MPI_DSM_CPULIST 4-219 |
12 |
setenv MALLOC_MMAP_MAX 0 |
setenv MALLOC_MMAP_MAX 0 |
15 |
setenv KMP_LIBRARY turnaround |
setenv KMP_LIBRARY turnaround |
16 |
limit stacksize unlimited |
limit stacksize unlimited |
17 |
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cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run |
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\cp ../input/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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18 |
\cp data.pkg_hr data.pkg |
\cp data.pkg_hr data.pkg |
19 |
\cp data.seaice_hr data.seaice |
\cp data.seaice_hr data.seaice |
20 |
\ln -sf ../../../../run_template/tile00* . |
\cp data.exf_clim_hr data.exf_clim |
21 |
\ln -sf ../../../../run_template/LEV* . |
\ln -sf /nobackup1/menemenl/cube/run_template/* . |
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\ln -sf ../../../../run_template/heff_file . |
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\ln -sf ../../../../run_template/ETOPO2_18360x85_ver5e_filled.bin . |
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22 |
cp ../build/mitgcmuv . |
cp ../build/mitgcmuv . |
23 |
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24 |
\cp data_hr data |
\cp data_hr data |
25 |
\cp data.exf_0 data.exf |
\cp data.exf_hr data.exf |
26 |
mpirun -np 216 ./mitgcmuv |
mpirun -np 216 ./mitgcmuv |
27 |
mkdir out.0 |
mkdir out.0 |
28 |
\mv STDOUT.0000 *.data pickup*.meta job_altix.* out.0 |
\mv STDOUT.0000 *.data pickup*.meta job_altix.* out.0 |
29 |
\cp data* job_altix out.0 |
\cp data* job_altix out.0 |
30 |
\rm STD* *.meta |
\rm STD* *.meta |
31 |
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|
32 |
\cp data_hr92 data |
#====>>> REMOVE FOLLOWING LINE TO STOP CHAIN <<<==== |
33 |
\cp data.exf_hr92 data.exf |
qsub job_altix92 |
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\ln -sf out.0/pickup.0000000864.data pickup.0000000216.data |
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\ln -sf out.0/pickup_seaice.0000000864.data pickup_seaice.0000000216.data |
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mpirun -np 216 ./mitgcmuv |
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mkdir out.1992 |
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\mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1992 |
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\cp data* job_altix out.1992 |
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\rm STD* *.meta |
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\cp data_hr93 data |
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\cp data.exf_hr93 data.exf |
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\ln -sf out.1992/pickup*.0*.data . |
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mpirun -np 216 dplace ./mitgcmuv |
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mkdir out.1993 |
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\mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1993 |
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\cp data* job_altix out.1993 |
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\rm STD* *.meta |
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