/[MITgcm]/MITgcm_contrib/high_res_cube/input/job_altix
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revision 1.2 by dimitri, Sat Jan 10 00:50:25 2004 UTC revision 1.22 by dimitri, Fri Jun 22 20:16:52 2007 UTC
# Line 1  Line 1 
1  #!/bin/sh  #!/bin/csh
2  #PBS -l ncpus=220  #PBS -l select=ncpus=216:s_1600=true
3  #PBS -l walltime=30:00:00  #PBS -q ecco
4    #PBS -l walltime=600:00:00
5  #PBS -j oe  #PBS -j oe
6  #PBS -q special  #PBS -l ignore_ded=1
7    #PBS -m abe
8    #PBS -M menemenlis@jpl.nasa.gov
9    #PBS -M hong.zhang@caltech.edu
10    
11  setenv MPI_USE_XPMEM  cd $PBS_O_WORKDIR
 setenv MPI_DSM_MUSTRUN  
 setenv MPI_DSM_CPULIST 3-220  
 setenv MALLOC_MMAP_MAX 0  
 setenv MALLOC_TRIM_THRESHOLD_ -1  
 setenv KMP_STACKSIZE 512000000  
 setenv KMP_BLOCKTIME 1000000  
 setenv KMP_LIBRARY turnaround  
 limit stacksize unlimited  
   
 cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run  
 \cp ../input/* .  
 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  
12    
13  \cp data.pkg_hr data.pkg  limit stacksize unlimited
 \cp data.seaice_hr data.seaice  
 \ln -sf ../../../../run_template/tile00* .  
 \ln -sf ../../../../run_template/LEV* .  
 \ln -sf ../../../../run_template/heff_file .  
 \ln -sf ../../../../run_template/ETOPO2_510x6x510_ver3b_filled.bin .  
 cp ../build/mitgcmuv .  
14    
15    \cp data.exf_clim_hr data.exf_clim
16    \cp data.exf_hr data.exf
17  \cp data_hr data  \cp data_hr data
18  \cp data.exf_0 data.exf  ./modpickup
19  mpirun -np 216 ./mitgcmuv  mpirun -np 216 ./mitgcmuv
 mkdir out.0  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.0  
 \cp data* job_altix out.0  
 \rm STD* *.meta  
   
 \cp data_hr92 data  
 \cp data.exf_hr92 data.exf  
 \ln -sf out.0/pickup.0000000864.data pickup.0000000216.data  
 \ln -sf out.0/pickup_seaice.0000000864.data pickup_seaice.0000000216.data  
 mpirun -np 216 ./mitgcmuv  
 mkdir out.1992  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1992  
 \cp data* job_altix out.1992  
 \rm STD* *.meta  
   
 \cp data_hr93 data  
 \cp data.exf_hr93 data.exf  
 \ln -sf out.1992/pickup*.0*.data .  
 mpirun -np 216 dplace ./mitgcmuv  
 mkdir out.1993  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1993  
 \cp data* job_altix out.1993  
 \rm STD* *.meta  
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