/[MITgcm]/MITgcm_contrib/high_res_cube/input/job_altix
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revision 1.3 by dimitri, Sun Jan 25 00:27:26 2004 UTC revision 1.16 by dimitri, Fri Jan 5 20:58:39 2007 UTC
# Line 1  Line 1 
1  #!/bin/csh  #!/bin/csh
2  #PBS -l ncpus=220  #PBS -l select=host=columbia15:ncpus=216
3  #PBS -l walltime=30:00:00  #PBS -q ecco
4    #PBS -l walltime=600:00:00
5  #PBS -j oe  #PBS -j oe
6  #PBS -q special  #PBS -l ignore_ded=1
7    #PBS -m abe
8    #PBS -M menemenlis@jpl.nasa.gov
9    #PBS -M hong.zhang@caltech.edu
10    
11  setenv MPI_USE_XPMEM  #====>>> REPLACE FOLLOWING LINE WITH CORRECT RUNTIME DIRECTORY <<<====
12  setenv MPI_DSM_CPULIST 4-219  cd /nobackup2a/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run
 setenv MALLOC_MMAP_MAX 0  
 setenv KMP_STACKSIZE 512000000  
 setenv KMP_BLOCKTIME 1000000  
 setenv KMP_LIBRARY turnaround  
 limit stacksize unlimited  
13    
14  cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run  limit stacksize unlimited
 \cp ../input/* .  
 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  
15    
16  \cp data.pkg_hr data.pkg  \cp data.pkg_hr data.pkg
17  \cp data.seaice_hr data.seaice  \cp data.seaice_hr data.seaice
18  \ln -sf ../../../../run_template/tile00* .  \cp data.exf_clim_hr data.exf_clim
19  \ln -sf ../../../../run_template/LEV* .  \cp data.exf_hr data.exf
 \ln -sf ../../../../run_template/heff_file .  
 \ln -sf ../../../../run_template/ETOPO2_18360x85_ver5e_filled.bin .  
 cp ../build/mitgcmuv .  
   
20  \cp data_hr data  \cp data_hr data
21  \cp data.exf_0 data.exf  ./modpickup
22  mpirun -np 216 ./mitgcmuv  mpirun -np 216 ./mitgcmuv
 mkdir out.0  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.0  
 \cp data* job_altix out.0  
 \rm STD* *.meta  
   
 \cp data_hr92 data  
 \cp data.exf_hr92 data.exf  
 \ln -sf out.0/pickup.0000000864.data pickup.0000000216.data  
 \ln -sf out.0/pickup_seaice.0000000864.data pickup_seaice.0000000216.data  
 mpirun -np 216 ./mitgcmuv  
 mkdir out.1992  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1992  
 \cp data* job_altix out.1992  
 \rm STD* *.meta  
   
 \cp data_hr93 data  
 \cp data.exf_hr93 data.exf  
 \ln -sf out.1992/pickup*.0*.data .  
 mpirun -np 216 dplace ./mitgcmuv  
 mkdir out.1993  
 \mv STDOUT.0000 *.data pickup*.meta job_altix.* out.1993  
 \cp data* job_altix out.1993  
 \rm STD* *.meta  
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