Annotation of /MITgcm_contrib/high_res_cube/input/job_altix

#!/bin/csh
#PBS -l ncpus=220
#PBS -l walltime=30:00:00
#PBS -j oe
#PBS -q special
#PBS -l ignore_ded=1

#====>>> REPLACE FOLLOWING LINE WITH CORRECT RUNTIME DIRECTORY <<<====
cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run

setenv MPI_USE_XPMEM
setenv MPI_DSM_CPULIST 4-219
setenv MALLOC_MMAP_MAX 0
setenv KMP_STACKSIZE 512000000
setenv KMP_BLOCKTIME 1000000
setenv KMP_LIBRARY turnaround
limit stacksize unlimited

\cp data.pkg_hr data.pkg
\cp data.seaice_hr data.seaice
\cp data.exf_clim_hr data.exf_clim
\ln -sf /nobackup1/menemenl/cube/run_template/* .
cp ../build/mitgcmuv .

\cp data_hr data
\cp data.exf_hr data.exf
mpirun -np 216 ./mitgcmuv
mkdir out.0
\mv STDOUT.0000 *.data pickup*.meta job_altix.* out.0
\cp data* job_altix out.0
\rm STD* *.meta

#====>>> REMOVE FOLLOWING LINE TO STOP CHAIN <<<====
qsub job_altix92
1	dimitri	1.3	#!/bin/csh
2	dimitri	1.2	#PBS -l ncpus=220
3	dimitri	1.1	#PBS -l walltime=30:00:00
4			#PBS -j oe
5			#PBS -q special
6	dimitri	1.7	#PBS -l ignore_ded=1
7	dimitri	1.2
8	dimitri	1.5	#====>>> REPLACE FOLLOWING LINE WITH CORRECT RUNTIME DIRECTORY <<<====
9			cd /nobackup1/menemenl/cube/MITgcm/verification/global_ocean.cs32x15/run
10
11	dimitri	1.2	setenv MPI_USE_XPMEM
12	dimitri	1.3	setenv MPI_DSM_CPULIST 4-219
13	dimitri	1.2	setenv MALLOC_MMAP_MAX 0
14			setenv KMP_STACKSIZE 512000000
15			setenv KMP_BLOCKTIME 1000000
16			setenv KMP_LIBRARY turnaround
17			limit stacksize unlimited
18
19			\cp data.pkg_hr data.pkg
20			\cp data.seaice_hr data.seaice
21	dimitri	1.4	\cp data.exf_clim_hr data.exf_clim
22	dimitri	1.5	\ln -sf /nobackup1/menemenl/cube/run_template/* .
23	dimitri	1.2	cp ../build/mitgcmuv .
24
25			\cp data_hr data
26	dimitri	1.4	\cp data.exf_hr data.exf
27	dimitri	1.2	mpirun -np 216 ./mitgcmuv
28			mkdir out.0
29			\mv STDOUT.0000 .data pickup.meta job_altix.* out.0
30			\cp data* job_altix out.0
31			\rm STD* *.meta
32
33	dimitri	1.5	#====>>> REMOVE FOLLOWING LINE TO STOP CHAIN <<<====
34			qsub job_altix92