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solution history
| 1 | mkdir cube92 |
| 2 | cd cube92 |
| 3 | |
| 4 | # get code from anonymous CVS server |
| 5 | cvs co MITgcm_contrib/high_res_cube/cube92 |
| 6 | cvs co -r checkpoint62h MITgcm_code |
| 7 | cd MITgcm |
| 8 | mkdir build run |
| 9 | |
| 10 | # build executable |
| 11 | cd build |
| 12 | ../tools/genmake2 -mo ../../MITgcm_contrib/high_res_cube/cube92/code -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas |
| 13 | make depend |
| 14 | make -j 16 |
| 15 | |
| 16 | # integrate model |
| 17 | cd ../run |
| 18 | cp ../../MITgcm_contrib/high_res_cube/cube92/input/* . |
| 19 | ln -sf /nobackup/hzhang1/cs510/run_template/*cube78 . |
| 20 | ln -sf /nobackup/hzhang1/cs510/run_template/tile* . |
| 21 | ln -sf /nobackup/hzhang1/cs510/run_template/GEBCO* . |
| 22 | mv pickup.0000000216.cube78 pickup.0000000216 |
| 23 | mv pickup.0000000216.meta.cube78 pickup.0000000216.meta |
| 24 | mv pickup_seaice.0000000216.cube78 pickup_seaice.0000000216 |
| 25 | mv pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta |
| 26 | ln -sf /nobackup/hzhang1/forcing/cube78_forcing . |
| 27 | ln -sf /nobackup/hzhang1/forcing/jra25 . |
| 28 | ln -sf ../build/mitgcmuv . |
| 29 | qsub run_cube92 |
| 30 | |
| 31 | |
| 32 | #update on 06/10/2013 regarding file location of initial conditions, forcing and building options |
| 33 | Initial condition and bathymetry files can be found here: |
| 34 | http://ecco2.jpl.nasa.gov/data1/cube/run_template/ |
| 35 | for run_template/, need |
| 36 | *cube78 |
| 37 | tile* |
| 38 | GEBCO* |
| 39 | |
| 40 | Forcing files are here: |
| 41 | There are 2 sets of forcing fields. Basically we use JRA25 now. |
| 42 | http://ecco2.jpl.nasa.gov/data2/data/atmos/blend_forcing/cube78_forcing/ |
| 43 | So for cube78_foring/, need |
| 44 | DIFFKR* |
| 45 | runoff* |
| 46 | |
| 47 | http://ecco2.jpl.nasa.gov/data2/data/atmos/jra25/ |
| 48 | for jra25/, download |
| 49 | jra25*_19?? |
| 50 | jra25*_20?? |
| 51 | |
| 52 | put three folders (run_template/, cube78_forcing/, and jra25/) aywhere. |
| 53 | Then look at http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/high_res_cube/cube92/README.cs510?view=markup |
| 54 | need to change line 19-21, line 26-27 (link those three folders or files therein to work directory) |
| 55 | |
| 56 | The build option above |
| 57 | http://mitgcm.org/viewvc/MITgcm/MITgcm/tools/build_options/linux_amd64_ifort+mpi_ice_nas |
| 58 | in line 12 of http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/high_res_cube/cube92/README.cs510?view=markup |
| 59 | is tailored for NASA supercompuer Pleiades. |
| 60 | A particular option file is needed for other computer. |
| 61 | A generic one is |
| 62 | http://mitgcm.org/viewvc/MITgcm/MITgcm/tools/build_options/linux_amd64_gfortran?view=markup&sortby=date |
| 63 | but one still needs to load some modules or export some environmnet variables before compiling |
| 64 | as shown by line 16-45. |
| 65 | |
| 66 | ==== solution history === |
| 67 | solution is piece-wise due to avalability of forcing dataset |
| 68 | 1992-2003 optimized blended forcing (cube78_forcing) |
| 69 | 2004-2008 jra25 and GPCP forcing |
| 70 | 2009-2019 jra55 and GPCP forcing |
| 71 | |
| 72 | output model-grid: |
| 73 | lfe:/u/hzhang1/cubes/cube92 |
| 74 | output interp to lat-lon grid: |
| 75 | ftp://ecco.jpl.nasa.gov/ECCO2/cube92_latlon_quart_90S90N/ |
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