Contents of /MITgcm_contrib/high_res_cube/README_ice

Instructions for setting up a cube-sphere integration with sea-ice.
Date last updated: February 17, 2005
Code and input used for integrating cube22.


##########################################################################
##########################################################################
# getting the code from anonymous CVS server

cvs co MITgcm_contrib/high_res_cube/README_ice
cvs co MITgcm_contrib/high_res_cube/code-mods
cvs co MITgcm_contrib/high_res_cube/input
cvs co MITgcm_contrib/high_res_cube/results
cvs co MITgcm_code
cvs co MITgcm/verification/global_ocean.cs32x15
cvs co MITgcm/verification/testreport


##########################################################################
##########################################################################
# 32*32*6*15, 1-cpu cube sphere

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../utils/exch2/code-mods/s12t_16x32/* .
cd ../build
\rm *
../../../tools/genmake2 -mods=../code
make depend
make
cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
../build/mitgcmuv >& output.txt

comparison output is in:
../../../../MITgcm_contrib/high_res_cube/results/output.txt

to use matlab to look at the output
matlab

for fld={'VICEtave','UICEtave','HEFFtave','AREAtave','QSWtave', ...
         'QNETtave','FVtave','FUtave','EmPmRtave'}
    tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
    cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
end

heff=permute(readbin(['HEFFtave.0000000020.data'],[32,6,32]),[1 3 2]);
mask=0*heff; mask(find(heff>.001))=1;
uice=mask.*permute(readbin(['UICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
vice=mask.*permute(readbin(['VICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
clf
subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3')
subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6')
subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3')
subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6')


##########################################################################
##########################################################################
# 32*32*6*15, 17-tile, 1-cpu cube sphere experiment

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../code_alt/code.176t_8x4/* .
cd ../build
\rm *
../../../tools/genmake2 -mods=../code
make depend
make
cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
../build/mitgcmuv >& output.txt


##########################################################################
##########################################################################
# 32*32*6*15, 2-cpu cube sphere on the altices with ifort

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../utils/exch2/code-mods/s12t_16x32/* .
\cp SIZE.h_mpi SIZE.h

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
mpirun -np 2 ../build/mitgcmuv


##########################################################################
##########################################################################
# 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
# starting with pickup file from end of 1992
# requires input files in sudirectories run_template and ncep_rgau

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
qsub job_altix92_54t


##########################################################################
##########################################################################
# 510*510*6*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics
# requires input files in sudirectories run_template and ncep_rgau
# these can be obained from lou:/u/menemenl/cube

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
\cp SIZE.h_216 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
ln -sf ../../../../run_template/* .
\rm pickup*
ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
\cp ../build/mitgcmuv .
qsub job_altix

##########################################################################
##########################################################################
# 510*510*6*50, 1500-tile, 150-cpu, excludes land
# uses s1500t_17x51 configuration

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
\cp SIZE.h_150 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
ln -sf ../../../../run_template/* .
\rm pickup*
ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
\cp ../build/mitgcmuv mitgcmuv150
qsub job_altix150


##########################################################################
##########################################################################
# 510*510*6*50, 1500-tile, 375-cpu, excludes land
# uses s1500t_17x51 configuration
# example for running on c17-c20 using arrayd

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
\cp SIZE.h_375 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
ln -sf ../../../../run_template/* .
\rm pickup*
ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
\cp ../build/mitgcmuv .
job_c20_375cpu < /dev/null >&! output.run &


##########################################################################
##########################################################################
# 510*510*6*50, 1500-tile, 500-cpu, excludes land
# uses s1500t_17x51 configuration
# example for running on c17-c20 using arrayd

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
\cp SIZE.h_500 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
ln -sf ../../../../run_template/* .
\rm pickup*
ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
\cp ../build/mitgcmuv .
job_c19_500cpu < /dev/null >&! output.run &


##########################################################################
##########################################################################
# 510*510*6*50, 216-cpu cube sphere on cosmos

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
\cp SIZE.h_216 SIZE.h
\cp packages.conf_hr packages.conf

module unload latest_intel80
module unload mpich-gm-intel80
module load latest_intel81
module load mpich-gm-intel81

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
ln -sf ../../../../run_template/* .
\rm pickup*
ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
\cp ../build/mitgcmuv .
bsub < job_cosmos


##########################################################################
##########################################################################
# 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
# requires input files in sudirectories run_template and ncep_rgau
# presently residing under orion:/tmp1/dmenem/cube

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
\cp SIZE.h_54 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
qsub job_orion


##########################################################################
##########################################################################
# 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
# requires input files in sudirectories run_template and ncep_rgau
# presently residing under orion:/tmp1/dmenem/cube

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
\cp SIZE.h_41 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
qsub job_orion41


##########################################################################
##########################################################################
# 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
# requires input files in sudirectories run_template and ncep_rgau
# presently residing under orion:/tmp1/dmenem/cube

cd MITgcm/verification/global_ocean.cs32x15/code
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
\cp SIZE.h_50 SIZE.h
\cp packages.conf_hr packages.conf

cd ../build
\rm *
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
make depend
make -j

cd ..
mkdir run
cd run
\rm *
\cp ../input/* .
\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
qsub job_orion
1	Instructions for setting up a cube-sphere integration with sea-ice.
2	Date last updated: February 17, 2005
3	Code and input used for integrating cube22.
4
5
6	##########################################################################
7	##########################################################################
8	# getting the code from anonymous CVS server
9
10	cvs co MITgcm_contrib/high_res_cube/README_ice
11	cvs co MITgcm_contrib/high_res_cube/code-mods
12	cvs co MITgcm_contrib/high_res_cube/input
13	cvs co MITgcm_contrib/high_res_cube/results
14	cvs co MITgcm_code
15	cvs co MITgcm/verification/global_ocean.cs32x15
16	cvs co MITgcm/verification/testreport
17
18
19	##########################################################################
20	##########################################################################
21	# 32326*15, 1-cpu cube sphere
22
23	cd MITgcm/verification/global_ocean.cs32x15/code
24	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
25	\cp ../../../utils/exch2/code-mods/s12t_16x32/* .
26	cd ../build
27	\rm *
28	../../../tools/genmake2 -mods=../code
29	make depend
30	make
31	cd ..
32	mkdir run
33	cd run
34	\rm *
35	\cp ../input/* .
36	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
37	../build/mitgcmuv >& output.txt
38
39	comparison output is in:
40	../../../../MITgcm_contrib/high_res_cube/results/output.txt
41
42	to use matlab to look at the output
43	matlab
44
45	for fld={'VICEtave','UICEtave','HEFFtave','AREAtave','QSWtave', ...
46	'QNETtave','FVtave','FUtave','EmPmRtave'}
47	tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
48	cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
49	end
50
51	heff=permute(readbin(['HEFFtave.0000000020.data'],[32,6,32]),[1 3 2]);
52	mask=0*heff; mask(find(heff>.001))=1;
53	uice=mask.*permute(readbin(['UICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
54	vice=mask.*permute(readbin(['VICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
55	clf
56	subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3')
57	subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6')
58	subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3')
59	subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6')
60
61
62	##########################################################################
63	##########################################################################
64	# 32326*15, 17-tile, 1-cpu cube sphere experiment
65
66	cd MITgcm/verification/global_ocean.cs32x15/code
67	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
68	\cp ../code_alt/code.176t_8x4/* .
69	cd ../build
70	\rm *
71	../../../tools/genmake2 -mods=../code
72	make depend
73	make
74	cd ..
75	mkdir run
76	cd run
77	\rm *
78	\cp ../input/* .
79	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
80	../build/mitgcmuv >& output.txt
81
82
83	##########################################################################
84	##########################################################################
85	# 32326*15, 2-cpu cube sphere on the altices with ifort
86
87	cd MITgcm/verification/global_ocean.cs32x15/code
88	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
89	\cp ../../../utils/exch2/code-mods/s12t_16x32/* .
90	\cp SIZE.h_mpi SIZE.h
91
92	cd ../build
93	\rm *
94	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
95	make depend
96	make -j
97
98	cd ..
99	mkdir run
100	cd run
101	\rm *
102	\cp ../input/* .
103	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
104	mpirun -np 2 ../build/mitgcmuv
105
106
107	##########################################################################
108	##########################################################################
109	# 5105106*50, 54-tile, 54-cpu cube sphere on the altices with efc
110	# starting with pickup file from end of 1992
111	# requires input files in sudirectories run_template and ncep_rgau
112
113	cd MITgcm/verification/global_ocean.cs32x15/code
114	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
115	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
116	\cp packages.conf_hr packages.conf
117
118	cd ../build
119	\rm *
120	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
121	make depend
122	make -j
123
124	cd ..
125	mkdir run
126	cd run
127	\rm *
128	\cp ../input/* .
129	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
130	qsub job_altix92_54t
131
132
133	##########################################################################
134	##########################################################################
135	# 5105106*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics
136	# requires input files in sudirectories run_template and ncep_rgau
137	# these can be obained from lou:/u/menemenl/cube
138
139	cd MITgcm/verification/global_ocean.cs32x15/code
140	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
141	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
142	\cp SIZE.h_216 SIZE.h
143	\cp packages.conf_hr packages.conf
144
145	cd ../build
146	\rm *
147	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
148	make depend
149	make -j
150
151	cd ..
152	mkdir run
153	cd run
154	\rm *
155	\cp ../input/* .
156	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
157	ln -sf ../../../../run_template/* .
158	\rm pickup*
159	ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
160	ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
161	\cp ../build/mitgcmuv .
162	qsub job_altix
163
164	##########################################################################
165	##########################################################################
166	# 5105106*50, 1500-tile, 150-cpu, excludes land
167	# uses s1500t_17x51 configuration
168
169	cd MITgcm/verification/global_ocean.cs32x15/code
170	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
171	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
172	\cp SIZE.h_150 SIZE.h
173	\cp packages.conf_hr packages.conf
174
175	cd ../build
176	\rm *
177	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
178	make depend
179	make -j
180
181	cd ..
182	mkdir run
183	cd run
184	\rm *
185	\cp ../input/* .
186	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
187	ln -sf ../../../../run_template/* .
188	\rm pickup*
189	ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
190	ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
191	\cp ../build/mitgcmuv mitgcmuv150
192	qsub job_altix150
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208	##########################################################################
209	##########################################################################
210	# 5105106*50, 1500-tile, 375-cpu, excludes land
211	# uses s1500t_17x51 configuration
212	# example for running on c17-c20 using arrayd
213
214	cd MITgcm/verification/global_ocean.cs32x15/code
215	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
216	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
217	\cp SIZE.h_375 SIZE.h
218	\cp packages.conf_hr packages.conf
219
220	cd ../build
221	\rm *
222	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
223	make depend
224	make -j
225
226	cd ..
227	mkdir run
228	cd run
229	\rm *
230	\cp ../input/* .
231	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
232	ln -sf ../../../../run_template/* .
233	\rm pickup*
234	ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
235	ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
236	\cp ../build/mitgcmuv .
237	job_c20_375cpu < /dev/null >&! output.run &
238
239
240	##########################################################################
241	##########################################################################
242	# 5105106*50, 1500-tile, 500-cpu, excludes land
243	# uses s1500t_17x51 configuration
244	# example for running on c17-c20 using arrayd
245
246	cd MITgcm/verification/global_ocean.cs32x15/code
247	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
248	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
249	\cp SIZE.h_500 SIZE.h
250	\cp packages.conf_hr packages.conf
251
252	cd ../build
253	\rm *
254	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
255	make depend
256	make -j
257
258	cd ..
259	mkdir run
260	cd run
261	\rm *
262	\cp ../input/* .
263	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
264	ln -sf ../../../../run_template/* .
265	\rm pickup*
266	ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
267	ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
268	\cp ../build/mitgcmuv .
269	job_c19_500cpu < /dev/null >&! output.run &
270
271
272
273
274
275	##########################################################################
276	##########################################################################
277	# 5105106*50, 216-cpu cube sphere on cosmos
278
279	cd MITgcm/verification/global_ocean.cs32x15/code
280	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
281	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
282	\cp SIZE.h_216 SIZE.h
283	\cp packages.conf_hr packages.conf
284
285	module unload latest_intel80
286	module unload mpich-gm-intel80
287	module load latest_intel81
288	module load mpich-gm-intel81
289
290	cd ../build
291	\rm *
292	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos
293	make depend
294	make -j
295
296	cd ..
297	mkdir run
298	cd run
299	\rm *
300	\cp ../input/* .
301	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
302	ln -sf ../../../../run_template/* .
303	\rm pickup*
304	ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216.data
305	ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216.data
306	\cp ../build/mitgcmuv .
307	bsub < job_cosmos
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328	##########################################################################
329	##########################################################################
330	# 5105106*50, 216-tile, 54-cpu cube sphere on the altices with efc
331	# requires input files in sudirectories run_template and ncep_rgau
332	# presently residing under orion:/tmp1/dmenem/cube
333
334	cd MITgcm/verification/global_ocean.cs32x15/code
335	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
336	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
337	\cp SIZE.h_54 SIZE.h
338	\cp packages.conf_hr packages.conf
339
340	cd ../build
341	\rm *
342	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
343	make depend
344	make -j
345
346	cd ..
347	mkdir run
348	cd run
349	\rm *
350	\cp ../input/* .
351	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
352	qsub job_orion
353
354
355	##########################################################################
356	##########################################################################
357	# 5105106*50, 205-tile, 41-cpu cube sphere on the altices with efc
358	# requires input files in sudirectories run_template and ncep_rgau
359	# presently residing under orion:/tmp1/dmenem/cube
360
361	cd MITgcm/verification/global_ocean.cs32x15/code
362	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
363	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
364	\cp SIZE.h_41 SIZE.h
365	\cp packages.conf_hr packages.conf
366
367	cd ../build
368	\rm *
369	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
370	make depend
371	make -j
372
373	cd ..
374	mkdir run
375	cd run
376	\rm *
377	\cp ../input/* .
378	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
379	qsub job_orion41
380
381
382	##########################################################################
383	##########################################################################
384	# 5105106*50, 1500-tile, 50-cpu cube sphere on the altices with efc
385	# requires input files in sudirectories run_template and ncep_rgau
386	# presently residing under orion:/tmp1/dmenem/cube
387
388	cd MITgcm/verification/global_ocean.cs32x15/code
389	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
390	\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
391	\cp SIZE.h_50 SIZE.h
392	\cp packages.conf_hr packages.conf
393
394	cd ../build
395	\rm *
396	../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
397	make depend
398	make -j
399
400	cd ..
401	mkdir run
402	cd run
403	\rm *
404	\cp ../input/* .
405	\cp ../../../../MITgcm_contrib/high_res_cube/input/* .
406	qsub job_orion