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Contents of /MITgcm_contrib/high_res_cube/README_ice

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Revision 1.38 - (show annotations) (download)
Sun Jun 27 21:05:37 2004 UTC (21 years, 1 month ago) by dimitri
Branch: MAIN
Changes since 1.37: +7 -8 lines
Modified Files:	edge_problem/readme.txt high_res_cube/README_ice

1 Instructions for setting up a cube-sphere integration with sea-ice.
2 Date last tested: March 28, 2004.
3 Code and input used for integrating cube5.
4
5
6 ##########################################################################
7 ##########################################################################
8 # getting the code from anonymous CVS server
9
10 cvs co MITgcm_contrib/high_res_cube/README_ice
11 cvs co MITgcm_contrib/high_res_cube/code-mods
12 cvs co MITgcm_contrib/high_res_cube/input
13 cvs co MITgcm_contrib/high_res_cube/results
14 cvs co MITgcm_contrib/edge_problem
15 cvs co MITgcm_code
16 cvs co MITgcm/verification/global_ocean.cs32x15
17
18
19 ##########################################################################
20 ##########################################################################
21 # 32*32*6*15, 1-cpu cube sphere
22
23 cd MITgcm/verification/global_ocean.cs32x15/code
24 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
25 \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
26 cd ../build
27 \rm *
28 ../../../tools/genmake2 -mods=../code
29 make depend
30 make
31 cd ..
32 mkdir run
33 cd run
34 \rm *
35 \cp ../input/* .
36 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
37 ../build/mitgcmuv >& output.txt
38
39 comparison output is in:
40 ../../../../MITgcm_contrib/high_res_cube/results/output.txt
41
42 to use matlab to look at the output
43 matlab
44
45 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
46 tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
47 cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
48 end
49
50 heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
51 mask=0*heff; mask(find(heff>.001))=1;
52 uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
53 vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
54 clf
55 subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
56 subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
57 subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
58 subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
59
60
61 ##########################################################################
62 ##########################################################################
63 # 32*32*6*15, 17-tile, 1-cpu cube sphere experiment
64
65 cd MITgcm/verification/global_ocean.cs32x15/code
66 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
67 \cp ../code_alt/code.176t_8x4/* .
68 cd ../build
69 \rm *
70 ../../../tools/genmake2 -mods=../code
71 make depend
72 make
73 cd ..
74 mkdir run
75 cd run
76 \rm *
77 \cp ../input/* .
78 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
79 ../build/mitgcmuv >& output.txt
80
81 comparison output is in:
82 ../../../../MITgcm_contrib/high_res_cube/results/output.txt
83
84 to use matlab to look at the output
85 matlab
86
87 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
88 tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
89 cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
90 end
91
92 heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
93 mask=0*heff; mask(find(heff>.001))=1;
94 uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
95 vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
96 clf
97 subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
98 subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
99 subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
100 subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
101
102
103 ##########################################################################
104 ##########################################################################
105 # 32*32*6*15, 2-cpu cube sphere on the altices with efc
106
107 cd MITgcm/verification/global_ocean.cs32x15/code
108 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
109 \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
110 \cp SIZE.h_mpi SIZE.h
111
112 cd ../build
113 \rm *
114 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
115 make depend
116 make
117
118 cd ..
119 mkdir run
120 cd run
121 \rm *
122 \cp ../input/* .
123 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
124 mpirun -np 2 ../build/mitgcmuv
125
126
127 ##########################################################################
128 ##########################################################################
129 # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
130 # requires input files in sudirectories run_template and ncep_rgau
131 # presently residing under orion:/tmp1/dmenem/cube
132
133 cd MITgcm/verification/global_ocean.cs32x15/code
134 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
135 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
136 \cp SIZE.h_54 SIZE.h
137 \cp packages.conf_hr packages.conf
138
139 cd ../build
140 \rm *
141 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
142 make depend
143 make
144
145 cd ..
146 mkdir run
147 cd run
148 \rm *
149 \cp ../input/* .
150 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
151 qsub job_orion
152
153
154 ##########################################################################
155 ##########################################################################
156 # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
157 # starting with pickup file from end of 1992
158 # requires input files in sudirectories run_template and ncep_rgau
159 # presently residing under orion:/tmp1/dmenem/cube
160
161 cd MITgcm/verification/global_ocean.cs32x15/code
162 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
163 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
164 \cp packages.conf_hr packages.conf
165
166 cd ../build
167 \rm *
168 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
169 make depend
170 make
171
172 cd ..
173 mkdir run
174 cd run
175 \rm *
176 \cp ../input/* .
177 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
178 qsub job_altix93_newIO
179
180
181 ##########################################################################
182 ##########################################################################
183 # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
184 # requires input files in sudirectories run_template and ncep_rgau
185 # presently residing under orion:/tmp1/dmenem/cube
186
187 cd MITgcm/verification/global_ocean.cs32x15/code
188 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
189 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
190 \cp SIZE.h_41 SIZE.h
191 \cp packages.conf_hr packages.conf
192
193 cd ../build
194 \rm *
195 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
196 make depend
197 make
198
199 cd ..
200 mkdir run
201 cd run
202 \rm *
203 \cp ../input/* .
204 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
205 qsub job_orion41
206
207
208 ##########################################################################
209 ##########################################################################
210 # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
211 # requires input files in sudirectories run_template and ncep_rgau
212 # presently residing under orion:/tmp1/dmenem/cube
213
214 cd MITgcm/verification/global_ocean.cs32x15/code
215 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
216 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
217 \cp SIZE.h_50 SIZE.h
218 \cp packages.conf_hr packages.conf
219
220 cd ../build
221 \rm *
222 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
223 make depend
224 make
225
226 cd ..
227 mkdir run
228 cd run
229 \rm *
230 \cp ../input/* .
231 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
232 qsub job_orion
233
234
235 ##########################################################################
236 ##########################################################################
237 # 510*510*6*50, 216-cpu cube sphere on altix with efc
238 # requires input files in sudirectories run_template and ncep_rgau
239 # these can be obained from lou:/u/menemenl/cube
240
241 cd MITgcm/verification/global_ocean.cs32x15/code
242 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
243 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
244 \cp SIZE.h_216 SIZE.h
245 \cp packages.conf_hr packages.conf
246
247 cd ../build
248 \rm *
249 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
250 make depend
251 make
252
253 cd ..
254 mkdir run
255 cd run
256 \rm *
257 \cp ../input/* .
258 \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
259 qsub job_altix
260
261
262 ##########################################################################
263 ##########################################################################
264 # matlab script for generating pChkptFreq
265
266 nTimeSteps=26352;
267 for niter0=216:26352:(26352*12)
268 pChkptFreq=(niter0+nTimeSteps)*1200;
269 day=pChkptFreq/24/60/60;
270 disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
271 datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)])
272 end
273
274 niter0 = 216 , day = 369 , 04-Jan-1993, pChkptFreq = 31881600
275 niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000
276 niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400
277 niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800
278 niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200
279 niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600
280 niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000
281 niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400
282 niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
283 niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
284 niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600
285 niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000

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