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Instructions for setting up a cube-sphere integration with sea-ice. |
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Date last tested: December 11, 2003. |
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########################################################################## |
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########################################################################## |
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# 32*32*6*15, 1-cpu cube sphere |
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results |
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cvs co -r checkpoint52d_pre MITgcm_code |
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cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15 |
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|
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cd MITgcm/verification/global_ocean.cs32x15/code |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* . |
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\rm mdsio_readfield.F |
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|
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cd .. |
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mkdir build |
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cd build |
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../../../tools/genmake2 -mods=../code |
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make depend |
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make |
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cd .. |
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mkdir run |
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cd run |
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\cp ../input/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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../build/mitgcmuv >& output.txt |
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comparison output is in: |
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../../../../MITgcm_contrib/high_res_cube/results/output.txt |
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to use matlab to look at the output |
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matlab |
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for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'} |
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tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]); |
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cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause |
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end |
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########################################################################## |
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########################################################################## |
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# 32*32*6*15, 2-cpu cube sphere on the altices with efc |
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|
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results |
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cvs co -r checkpoint52d_pre MITgcm_code |
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cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15 |
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|
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cd MITgcm/verification/global_ocean.cs32x15/code |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* . |
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\cp SIZE.h_mpi SIZE.h |
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\cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h |
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\rm mdsio_readfield.F |
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cd .. |
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mkdir build |
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cd build |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
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make depend |
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make |
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cd .. |
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mkdir run |
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cd run |
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\cp ../input/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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mpirun -np 2 ../build/mitgcmuv |
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########################################################################## |
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########################################################################## |
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# 510*510*6*50, 54-cpu cube sphere on the altices with efc |
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results |
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cvs co -r checkpoint52d_pre MITgcm_code |
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cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15 |
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cd MITgcm/verification/global_ocean.cs32x15/code |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
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\cp SIZE.h_54 SIZE.h |
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\cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h |
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\cp packages.conf_hr packages.conf |
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\cp mom_vi_hdissip.F_hr mom_vi_hdissip.F |
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\rm mdsio_readfield.F |
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cd .. |
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mkdir build |
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cd build |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
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make depend |
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make |
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cd .. |
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mkdir run |
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cd run |
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\cp ../input/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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\cp data_hr data |
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\cp data.pkg_hr data.pkg |
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\ln -sf ../../../../run_template/tile00* . |
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\ln -sf ../../../../run_template/LEV* . |
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\ln -sf ../../../../run_template/BATHY_18360x85_filled.bin . |
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qsub job_orion |
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########################################################################## |
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########################################################################## |
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# 510*510*6*50, 216-cpu cube sphere on altix with efc |
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|
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input |
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cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results |
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cvs co -r checkpoint52d_pre MITgcm_code |
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cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15 |
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cd MITgcm/verification/global_ocean.cs32x15/code |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
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\cp SIZE.h_216 SIZE.h |
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\cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h |
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\cp packages.conf_hr packages.conf |
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\cp mom_vi_hdissip.F_hr mom_vi_hdissip.F |
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\rm mdsio_readfield.F |
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cd .. |
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mkdir build |
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cd build |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
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make depend |
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make |
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cd .. |
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mkdir run |
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cd run |
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qsub job_altix |
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