1 |
Instructions for setting up a cube-sphere integration with sea-ice. |
Instructions for setting up a cube-sphere integration with sea-ice. |
2 |
Date last tested: March 28, 2004. |
Date last tested: July 9, 2004. |
3 |
Code and input used for integrating cube5. |
Code and input used for integrating cube9. |
4 |
|
|
5 |
|
|
6 |
########################################################################## |
########################################################################## |
12 |
cvs co MITgcm_contrib/high_res_cube/input |
cvs co MITgcm_contrib/high_res_cube/input |
13 |
cvs co MITgcm_contrib/high_res_cube/results |
cvs co MITgcm_contrib/high_res_cube/results |
14 |
cvs co MITgcm_contrib/edge_problem |
cvs co MITgcm_contrib/edge_problem |
15 |
cvs co MITgcm_code |
cvs co -r checkpoint54b_post MITgcm_code |
16 |
cvs co MITgcm/verification/global_ocean.cs32x15 |
cvs co -r checkpoint54b_post MITgcm/verification/global_ocean.cs32x15 |
17 |
cvs co MITgcm/verification/testreport |
cvs co -r checkpoint54b_post MITgcm/verification/testreport |
18 |
|
|
19 |
|
|
20 |
########################################################################## |
########################################################################## |
112 |
|
|
113 |
cd ../build |
cd ../build |
114 |
\rm * |
\rm * |
115 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
116 |
make depend |
make depend |
117 |
make |
make -j |
118 |
|
|
119 |
cd .. |
cd .. |
120 |
mkdir run |
mkdir run |
139 |
|
|
140 |
cd ../build |
cd ../build |
141 |
\rm * |
\rm * |
142 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
143 |
make depend |
make depend |
144 |
make |
make -j |
145 |
|
|
146 |
cd .. |
cd .. |
147 |
mkdir run |
mkdir run |
167 |
\rm * |
\rm * |
168 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
169 |
make depend |
make depend |
170 |
make |
make -j |
171 |
|
|
172 |
cd .. |
cd .. |
173 |
mkdir run |
mkdir run |
175 |
\rm * |
\rm * |
176 |
\cp ../input/* . |
\cp ../input/* . |
177 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
178 |
qsub job_altix93_newIO |
qsub job_altix92_54t |
179 |
|
|
180 |
|
|
181 |
########################################################################## |
########################################################################## |
182 |
########################################################################## |
########################################################################## |
183 |
# 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc |
# 510*510*6*50, 216-cpu cube sphere on altix with efc |
184 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
185 |
# presently residing under orion:/tmp1/dmenem/cube |
# these can be obained from lou:/u/menemenl/cube |
186 |
|
|
187 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
188 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
189 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
190 |
\cp SIZE.h_41 SIZE.h |
\cp SIZE.h_216 SIZE.h |
191 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
192 |
|
|
193 |
cd ../build |
cd ../build |
194 |
\rm * |
\rm * |
195 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
196 |
make depend |
make depend |
197 |
make |
make -j |
198 |
|
|
199 |
cd .. |
cd .. |
200 |
mkdir run |
mkdir run |
202 |
\rm * |
\rm * |
203 |
\cp ../input/* . |
\cp ../input/* . |
204 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
205 |
qsub job_orion41 |
qsub job_altix92 |
206 |
|
|
207 |
|
|
208 |
|
|
209 |
|
|
210 |
|
|
211 |
|
|
212 |
|
|
213 |
|
|
214 |
|
|
215 |
|
|
216 |
|
|
217 |
|
|
218 |
|
|
219 |
|
|
220 |
|
|
221 |
|
|
222 |
|
|
223 |
|
|
224 |
|
|
225 |
|
|
226 |
|
|
227 |
|
|
228 |
|
|
229 |
|
|
230 |
|
|
231 |
|
|
232 |
|
|
233 |
########################################################################## |
########################################################################## |
234 |
########################################################################## |
########################################################################## |
235 |
# 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc |
# 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc |
236 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
237 |
# presently residing under orion:/tmp1/dmenem/cube |
# presently residing under orion:/tmp1/dmenem/cube |
238 |
|
|
239 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
240 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
241 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* . |
242 |
\cp SIZE.h_50 SIZE.h |
\cp SIZE.h_41 SIZE.h |
243 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
244 |
|
|
245 |
cd ../build |
cd ../build |
246 |
\rm * |
\rm * |
247 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
248 |
make depend |
make depend |
249 |
make |
make -j |
250 |
|
|
251 |
cd .. |
cd .. |
252 |
mkdir run |
mkdir run |
254 |
\rm * |
\rm * |
255 |
\cp ../input/* . |
\cp ../input/* . |
256 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
257 |
qsub job_orion |
qsub job_orion41 |
258 |
|
|
259 |
|
|
260 |
########################################################################## |
########################################################################## |
261 |
########################################################################## |
########################################################################## |
262 |
# 510*510*6*50, 216-cpu cube sphere on altix with efc |
# 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc |
263 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
264 |
# these can be obained from lou:/u/menemenl/cube |
# presently residing under orion:/tmp1/dmenem/cube |
265 |
|
|
266 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
267 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
268 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
269 |
\cp SIZE.h_216 SIZE.h |
\cp SIZE.h_50 SIZE.h |
270 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
271 |
|
|
272 |
cd ../build |
cd ../build |
273 |
\rm * |
\rm * |
274 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
275 |
make depend |
make depend |
276 |
make |
make -j |
277 |
|
|
278 |
cd .. |
cd .. |
279 |
mkdir run |
mkdir run |
281 |
\rm * |
\rm * |
282 |
\cp ../input/* . |
\cp ../input/* . |
283 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
284 |
qsub job_altix |
qsub job_orion |
285 |
|
|
286 |
|
|
287 |
########################################################################## |
########################################################################## |